Strain identifier

BacDive ID: 148182

Type strain: No

Species: Janibacter limosus

NCBI tax ID(s): 53458 (species)

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General

@ref: 52445

BacDive-ID: 148182

keywords: Bacteria

description: Janibacter limosus CCUG 35001 is a bacterium that was isolated from Human blood,5-month-old male,trombocytopenia....

NCBI tax id

  • NCBI tax id: 53458
  • Matching level: species

doi: 10.13145/bacdive148182.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Intrasporangiaceae
  • genus: Janibacter
  • species: Janibacter limosus
  • full scientific name: Janibacter limosus Martin et al. 1997

@ref: 52445

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Intrasporangiaceae

genus: Janibacter

species: Janibacter limosus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52445C15:01.115
    52445C16:01.916
    52445C17:01.417
    52445C18:00.618
    52445C13:0 iso0.412.612
    52445C14:0 ISO3.713.618
    52445C15:0 ANTEISO0.814.711
    52445C15:0 ISO9.314.621
    52445C15:1 ω6c0.814.856
    52445C16:0 iso33.415.626
    52445C16:1 ISO H2.215.461
    52445C16:1 ω7c5.215.819
    52445C17:0 10-methyl5.117.41
    52445C17:0 anteiso2.616.722
    52445C17:0 iso5.316.629
    52445C17:1 ω8c8.916.792
    52445C17:1 ω9c ISO4.616.416
    52445C18:0 ISO117.632
    52445C18:1 ω9c8.617.769
    52445C18:2 ω6,9c/C18:0 ANTE2.617.724
    52445C19:1 ω11c/19:1 ω9c0.618.762
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52445-+-+--+---+---------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52445-+++------+----+----

Isolation, sampling and environmental information

isolation

  • @ref: 52445
  • sample type: Human blood,5-month-old male,trombocytopenia...
  • sampling date: 1995-10-01
  • geographic location: Kristiansand S
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient
#Host#Human#Child

External links

@ref: 52445

culture collection no.: CCUG 35001

straininfo link

  • @ref: 102787
  • straininfo: 58119

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52445Curators of the CCUGhttps://www.ccug.se/strain?id=35001Culture Collection University of Gothenburg (CCUG) (CCUG 35001)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
102787Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID58119.1