Strain identifier

BacDive ID: 147957

Type strain: No

Species: Cutibacterium avidum

NCBI tax ID(s): 33010 (species)

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General

@ref: 52187

BacDive-ID: 147957

keywords: Bacteria

description: Cutibacterium avidum CCUG 34578 A is a bacterium that was isolated from Human abscess,thorax.

NCBI tax id

  • NCBI tax id: 33010
  • Matching level: species

doi: 10.13145/bacdive147957.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Propionibacteriales
  • family: Propionibacteriaceae
  • genus: Cutibacterium
  • species: Cutibacterium avidum
  • full scientific name: Cutibacterium avidum (Eggerth 1935) Scholz and Kilian 2016

  • synonyms

    @refsynonym
    20215Bacteroides avidus
    20215Propionibacterium avidum

@ref: 52187

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Propionibacteriales

family: Propionibacteriaceae

genus: Cutibacterium

species: Cutibacterium avidum

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52187C14:00.614
    52187C15:08.715
    52187C16:0516
    52187C17:01.517
    52187C18:01.218
    52187C14:0 ISO0.513.618
    52187C14:0 ISO 3OH2.715.117
    52187C15:0 ANTEISO7.214.711
    52187C15:0 ISO4914.621
    52187C16:0 iso2.415.626
    52187C16:1 ISO H2.115.461
    52187C17:0 anteiso1.316.722
    52187C17:0 iso8.116.629
    52187C17:1 ω5c ISO116.461
    52187C18:1 ω9c2.517.769
    52187C18:2 ω6,9c/C18:0 ANTE2.517.724
    52187Unidentified0.910.793
    52187Unidentified0.813.931
    52187Unidentified0.616.097
    52187Unidentified0.717.097
    52187unknown 13.5660.813.566
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52187-+--++++-+-++--+-+-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52187--++-+----+--+-++++-

Isolation, sampling and environmental information

isolation

  • @ref: 52187
  • sample type: Human abscess,thorax
  • sampling date: 1995-06-01
  • geographic location: Tromsö
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Abscess
#Host Body-Site#Other#Thoracic segment
#Infection#Patient

External links

@ref: 52187

culture collection no.: CCUG 34578 A

straininfo link

  • @ref: 102598
  • straininfo: 56379

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52187Curators of the CCUGhttps://www.ccug.se/strain?id=34578Culture Collection University of Gothenburg (CCUG) (CCUG 34578 A)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
102598Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID56379.1