Strain identifier

BacDive ID: 147872

Type strain: No

Species: Burkholderia vietnamiensis

NCBI tax ID(s): 60552 (species)

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General

@ref: 52093

BacDive-ID: 147872

keywords: Bacteria

description: Burkholderia vietnamiensis CCUG 34413 is a bacterium that was isolated from Human respiratory tract,cystic fibrosis,24-yr-old.

NCBI tax id

  • NCBI tax id: 60552
  • Matching level: species

doi: 10.13145/bacdive147872.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia vietnamiensis
  • full scientific name: Burkholderia vietnamiensis Gillis et al. 1995

@ref: 52093

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia vietnamiensis

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52093C14:04.814
    52093C15:00.515
    52093C16:017.516
    52093C17:00.417
    52093C18:00.418
    52093C14:0 3OH/C16:1 ISO I5.615.485
    52093C15:1 ω6c0.314.856
    52093C16:0 2OH2.617.233
    52093C16:0 3OH4.717.52
    52093C16:0 iso 3OH1.717.145
    52093C16:1 2OH2.217.047
    52093C16:1 ω7c18.515.819
    52093C17:0 CYCLO4.916.888
    52093C18:1 2OH4.719.088
    52093C18:1 ω7c /12t/9t3217.824
    52093C19:0 CYCLO ω8c118.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52093-+++++----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
52093+------++++++-++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 52093
  • sample type: Human respiratory tract,cystic fibrosis,24-yr-old
  • sampling date: 1993-11-16
  • geographic location: Huddinge
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 52093

culture collection no.: CCUG 34413, LMG 16228

straininfo link

  • @ref: 102523
  • straininfo: 8387

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
52093Curators of the CCUGhttps://www.ccug.se/strain?id=34413Culture Collection University of Gothenburg (CCUG) (CCUG 34413)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
102523Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID8387.1