Strain identifier
version 8.1 (current version)
General
@ref: 51803
BacDive-ID: 147612
keywords: Bacteria, microaerophile, mesophilic
description: Helicobacter canicola CCUG 33887 is a microaerophile, mesophilic bacterium that was isolated from Canine feces,pudel,20-month-old male.
NCBI tax id
- NCBI tax id: 1869279
- Matching level: species
doi: 10.13145/bacdive147612.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Helicobacteraceae
- genus: Helicobacter
- species: Helicobacter canicola
- full scientific name: Helicobacter canicola Kawamura et al. 2016
@ref: 51803
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Helicobacteraceae
genus: Helicobacter
species: Helicobacter canicola
type strain: no
Culture and growth conditions
culture temp
- @ref: 51803
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 51803
- oxygen tolerance: microaerophile
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 51803 C12:0 12.2 12 51803 C13:0 0.4 13 51803 C14:0 23.5 14 51803 C15:0 0.5 15 51803 C16:0 27.5 16 51803 C12:0 3OH 4.3 13.455 51803 C14:0 ISO 0.6 13.618 51803 C16:0 3OH 7.6 17.52 51803 C16:1 ω7c 1.3 15.819 51803 C18:1 ω7c /12t/9t 19.2 17.824 51803 C18:2 ω6,9c/C18:0 ANTE 2.1 17.724 51803 C19:0 CYCLO ω8c 0.8 18.9 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 51803
- sample type: Canine feces,pudel,20-month-old male
- sampling date: 1995-01-30
- geographic location: Floda,Hallberg Gun
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Canidae (Dog) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
External links
@ref: 51803
culture collection no.: CCUG 33887, LMG 29580
straininfo link
- @ref: 102300
- straininfo: 8232
literature
- topic: Phylogeny
- Pubmed-ID: 27381809
- title: Proposal of Helicobacter canicola sp. nov., previously identified as Helicobacter cinaedi, isolated from canines.
- authors: Kawamura Y, Tomida J, Miyoshi-Akiyama T, Okamoto T, Narita M, Hashimoto K, Cnockaert M, Vandamme P, Morita Y, Sawa T, Akaike T
- journal: Syst Appl Microbiol
- DOI: 10.1016/j.syapm.2016.06.004
- year: 2016
- mesh: Alkaline Phosphatase/genetics, Animals, Chaperonin 60/*genetics, DNA Gyrase/*genetics, DNA, Bacterial/genetics, Dogs/*microbiology, Genome, Bacterial/genetics, *Helicobacter/classification/genetics/isolation & purification, Humans, Molecular Typing/*veterinary, Nitrates/metabolism, Nitrites/metabolism, Phylogeny, RNA, Ribosomal, 16S/*genetics, RNA, Ribosomal, 23S/*genetics, Sequence Analysis, DNA
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 51803 | Curators of the CCUG | https://www.ccug.se/strain?id=33887 | Culture Collection University of Gothenburg (CCUG) (CCUG 33887) | |
| 102300 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID8232.1 |