Strain identifier

BacDive ID: 147479

Type strain: No

Species: Pseudomonas sp.

NCBI tax ID(s): 306 (species)

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General

@ref: 51660

BacDive-ID: 147479

keywords: Bacteria

description: Pseudomonas sp. CCUG 33664 is a bacterium that was isolated from Euphorbia pulcherrima gall.

NCBI tax id

  • NCBI tax id: 306
  • Matching level: species

doi: 10.13145/bacdive147479.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas sp.
  • full scientific name: Pseudomonas Migula 1894 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Serpens
    20215Flavimonas
    20215Stutzerimonas

@ref: 51660

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas sp.

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine+hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase-1.9.3.1
68369gelatinase+
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase+3.5.3.6
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51660C10:00.310
    51660C12:0112
    51660C14:00.514
    51660C15:00.915
    51660C16:029.816
    51660C17:00.417
    51660C18:00.418
    51660C10:0 3OH5.411.423
    51660C12:0 2OH713.178
    51660C12:0 3OH4.513.455
    51660C16:1 ω7c29.415.819
    51660C17:0 CYCLO5.316.888
    51660C17:1 ω8c0.316.792
    51660C18:1 ω7c /12t/9t13.717.824
    51660C18:2 ω6,9c/C18:0 ANTE0.817.724
    51660Unidentified0.310.477
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
51660---+-+--------------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
51660---+--+-+-----++-+++-

Isolation, sampling and environmental information

isolation

  • @ref: 51660
  • sample type: Euphorbia pulcherrima gall
  • sampling date: 1994-12-05
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Shrub (Scrub)
#Infection#Plant infections#Gall

External links

@ref: 51660

culture collection no.: CCUG 33664

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51660Curators of the CCUGhttps://www.ccug.se/strain?id=33664Culture Collection University of Gothenburg (CCUG) (CCUG 33664)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym