Strain identifier

BacDive ID: 14738

Type strain: No

Species: Streptococcus sp.

Strain Designation: 59015

Strain history: DSM 20379 <-- Kiel 59015 ("Streptococcus viridans").

NCBI tax ID(s): 1987064 (species)

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General

@ref: 8631

BacDive-ID: 14738

DSM-Number: 20379

keywords: 16S sequence, Bacteria, microaerophile, mesophilic

description: Streptococcus sp. 59015 is a microaerophile, mesophilic bacterium that was isolated from human plaque.

NCBI tax id

  • NCBI tax id: 1987064
  • Matching level: species

strain history

@refhistory
8631<- Kiel, 59015 (Streptococcus viridans biotype II)
67770DSM 20379 <-- Kiel 59015 ("Streptococcus viridans").

doi: 10.13145/bacdive14738.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Streptococcaceae
  • genus: Streptococcus
  • species: Streptococcus sp.
  • full scientific name: Streptococcus Rosenbach 1884 (Approved Lists 1980)

@ref: 8631

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus sp.

full scientific name: Streptococcus sp.

strain designation: 59015

type strain: no

Morphology

colony morphology

  • @ref: 8631
  • type of hemolysis: alpha
  • hemolysis ability: 1
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8631COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8631TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
8631positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 8631
  • oxygen tolerance: microaerophile

murein

  • @ref: 8631
  • murein short key: A11
  • type: A1alpha L-Lys-direct

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838129016arginine-hydrolysis
6838116988D-ribose-builds acid from
6838116899D-mannitol-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose+builds acid from
6838127082trehalose+builds acid from
6838116634raffinose-builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan+builds acid from
6838117306maltose+builds acid from
6838128053melibiose-builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside-builds acid from
6838116199urea-hydrolysis

metabolite production

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: no

metabolite tests

  • @ref: 68381
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
8631catalase-1.11.1.6
8631cytochrome-c oxidase-1.9.3.1
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase+
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase-3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase+
68381alkaline phosphatase+3.1.3.1
68381alpha-galactosidase+3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase-3.2.1.21
68381arginine dihydrolase-3.5.3.6

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
8631--+-++---++-+----+---+--++---+/---

Isolation, sampling and environmental information

isolation

@refsample type
8631human plaque
67770Human plaque

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Oral cavity and Airways#Dental plaque

taxonmaps

  • @ref: 69479
  • File name: preview.99_496.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_4;96_4;97_4;98_4;99_496&stattab=map
  • Last taxonomy: Streptococcus
  • 16S sequence: LC269276
  • Sequence Identity:
  • Total samples: 206
  • soil counts: 1
  • animal counts: 198
  • plant counts: 7

Sequence information

16S sequences

  • @ref: 67770
  • description: Streptococcus sp. JCM 5702 gene for 16S ribosomal RNA, partial sequence
  • accession: LC269276
  • length: 1492
  • database: ena
  • NCBI tax ID: 1987064

External links

@ref: 8631

culture collection no.: DSM 20379, JCM 5702

straininfo link

  • @ref: 83856
  • straininfo: 49618

Reference

@idauthorscataloguedoi/urltitle
8631Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20379)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20379
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68381Automatically annotated from API rID32STR
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83856Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49618.1StrainInfo: A central database for resolving microbial strain identifiers