Strain identifier

BacDive ID: 147318

Type strain: No

Species: Nocardia farcinica

NCBI tax ID(s): 37329 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 51475

BacDive-ID: 147318

keywords: Bacteria, aerobe, mesophilic

description: Nocardia farcinica CCUG 33358 is an aerobe, mesophilic bacterium that was isolated from Human abscess,right arm.

NCBI tax id

  • NCBI tax id: 37329
  • Matching level: species

doi: 10.13145/bacdive147318.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Nocardia
  • species: Nocardia farcinica
  • full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)

@ref: 51475

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Nocardia

species: Nocardia farcinica

type strain: no

Culture and growth conditions

culture temp

  • @ref: 51475
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 51475
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    51475C14:01.214
    51475C16:027.916
    51475C18:06.118
    51475C16:1 ω7c0.715.819
    51475C16:1 ω7c/C15:0 ISO 2OH15.815.85
    51475C18:1 ω9c14.717.769
    51475C18:2 ω6,9c/C18:0 ANTE5.917.724
    51475C20:1 ω9c3.719.77
    51475TBSA 10Me18:014.518.392
    51475Unidentified2.516.982
    51475unknown 14.966714.966
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
51475-+-+--+-++--------+-+

Isolation, sampling and environmental information

isolation

  • @ref: 51475
  • sample type: Human abscess,right arm
  • sampling date: 1994
  • geographic location: Stockholm,Södersjukhuset
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Other#Abscess
#Host Body-Site#Limb#Arm
#Infection#Patient

External links

@ref: 51475

culture collection no.: CCUG 33358

straininfo link

  • @ref: 102044
  • straininfo: 55978

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
51475Curators of the CCUGhttps://www.ccug.se/strain?id=33358Culture Collection University of Gothenburg (CCUG) (CCUG 33358)
68379Automatically annotated from API Coryne
102044Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID55978.1