Strain identifier

BacDive ID: 146582

Type strain: No

Species: Sphingomonas sp.

NCBI tax ID(s): 28214 (species)

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General

@ref: 50623

BacDive-ID: 146582

keywords: Bacteria, aerobe, mesophilic

description: Sphingomonas sp. CCUG 31493 is an aerobe, mesophilic bacterium of the family Sphingomonadaceae.

NCBI tax id

  • NCBI tax id: 28214
  • Matching level: species

doi: 10.13145/bacdive146582.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Sphingomonadales
  • family: Sphingomonadaceae
  • genus: Sphingomonas
  • species: Sphingomonas sp.
  • full scientific name: Sphingomonas Yabuuchi et al. 1990

@ref: 50623

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Sphingomonadales

family: Sphingomonadaceae

genus: Sphingomonas

species: Sphingomonas sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 50623
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 50623
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    50623C16:06.216
    50623C14:0 2OH9.615.205
    50623C16:0 iso 3OH2.917.145
    50623C16:1 ω5c2.215.908
    50623C16:1 ω7c33.315.819
    50623C17:1 ω6c2.416.862
    50623C18:1 ω5c1.617.919
    50623C18:1 ω7c /12t/9t40.317.824
    50623Unidentified1.7
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
50623-----+-+++---+------+

Isolation, sampling and environmental information

isolation

  • @ref: 50623
  • sampling date: 1993-04-01
  • geographic location: Mo i Rana
  • country: Norway
  • origin.country: NOR
  • continent: Europe

External links

@ref: 50623

culture collection no.: CCUG 31493

straininfo link

  • @ref: 101438
  • straininfo: 108430

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
50623Curators of the CCUGhttps://www.ccug.se/strain?id=31493Culture Collection University of Gothenburg (CCUG) (CCUG 31493)
68369Automatically annotated from API 20NE
101438Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID108430.1