Strain identifier

BacDive ID: 146004

Type strain: No

Species: Ornithobacterium rhinotracheale

NCBI tax ID(s): 28251 (species)

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General

@ref: 49926

BacDive-ID: 146004

keywords: 16S sequence, Bacteria

description: Ornithobacterium rhinotracheale CCUG 30124 is a bacterium that was isolated from Rook respiratory tract.

NCBI tax id

  • NCBI tax id: 28251
  • Matching level: species

doi: 10.13145/bacdive146004.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Weeksellaceae
  • genus: Ornithobacterium
  • species: Ornithobacterium rhinotracheale
  • full scientific name: Ornithobacterium rhinotracheale Vandamme et al. 1994

@ref: 49926

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Ornithobacterium

species: Ornithobacterium rhinotracheale

type strain: no

Physiology and metabolism

enzymes

@refvalueactivityec
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
49926-+++-++-++++++-+-+--

Isolation, sampling and environmental information

isolation

  • @ref: 49926
  • sample type: Rook respiratory tract
  • sampling date: 1983
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2
#Host#Birds
#Host Body-Site#Oral cavity and airways

Sequence information

16S sequences

  • @ref: 124043
  • description: Ornithobacterium rhinotracheale 16S ribosomal RNA gene, complete sequence.
  • accession: U87104
  • length: 1465
  • database: nuccore
  • NCBI tax ID: 28251

External links

@ref: 49926

culture collection no.: CCUG 30124, MCCM 01035, LMG 11554

straininfo link

  • @ref: 100937
  • straininfo: 7786

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
49926Curators of the CCUGhttps://www.ccug.se/strain?id=30124Culture Collection University of Gothenburg (CCUG) (CCUG 30124)
68382Automatically annotated from API zym
100937Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID7786.1
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy