Strain identifier

BacDive ID: 145546

Type strain: No

Species: Staphylococcus sp.

NCBI tax ID(s): 29387 (species)

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General

@ref: 49394

BacDive-ID: 145546

keywords: Bacteria, aerobe, mesophilic

description: Staphylococcus sp. CCUG 28807 is an aerobe, mesophilic bacterium that was isolated from Sheep abscess.

NCBI tax id

  • NCBI tax id: 29387
  • Matching level: species

doi: 10.13145/bacdive145546.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus sp.
  • full scientific name: Staphylococcus Rosenbach 1884 (Approved Lists 1980)

@ref: 49394

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 49394
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 49394
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
6837965327D-xylose+fermentation
6837916899D-mannitol+fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation
6837516199urea+hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine-degradation
683754853esculin+hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose-fermentation
6837516899D-mannitol+fermentation
6837516634raffinose-fermentation
6837516988D-ribose+fermentation
6837517057cellobiose+fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose-fermentation
6837522599arabinose+fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose+builds acid from
6837816024D-mannose+builds acid from
6837817306maltose+builds acid from
6837817716lactose+builds acid from
6837827082trehalose+builds acid from
6837816899D-mannitol-builds acid from
6837817151xylitol+builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose-builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose+builds acid from
68378320061methyl alpha-D-glucopyranoside+builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine+hydrolysis
6837816199urea-hydrolysis

antibiotic resistance

@refmetaboliteis antibioticis resistantChEBIresistance conc.
68378lysostaphinyesyes
68375novobiocinyesyes283681.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinyes
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin+
6837515688acetoin-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase+3.5.3.6
68378alkaline phosphatase+3.1.3.1
68375beta-glucuronidase+3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase+3.2.1.23
68375beta-glucosidase+3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease+3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase+3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49394C14:00.814
    49394C16:01.916
    49394C18:01.318
    49394C20:00.720
    49394C13:0 ANTEISO0.312.701
    49394C13:0 iso1.512.612
    49394C14:0 ISO1.913.618
    49394C15:0 ANTEISO65.414.711
    49394C15:0 ISO1514.621
    49394C16:0 iso0.915.626
    49394C17:0 anteiso4.916.722
    49394C17:0 iso2.516.629
    49394C18:1 ω9c0.817.769
    49394C18:2 ω6,9c/C18:0 ANTE1.217.724
    49394C19:0 ANTEISO0.318.729
    49394C19:0 ISO0.518.633
    49394Unidentified0.213.24
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
49394++++++-+++--+++++++-+

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
49394+--++++++-+-+++-+-+++++-++

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
49394-+++++-+--++--++-+-+

Isolation, sampling and environmental information

isolation

  • @ref: 49394
  • sample type: Sheep abscess
  • geographic location: Lyon
  • country: France
  • origin.country: FRA
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Other#Wound

External links

@ref: 49394

culture collection no.: CCUG 28807

straininfo link

  • @ref: 100534
  • straininfo: 57223

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
49394Curators of the CCUGhttps://www.ccug.se/strain?id=28807Culture Collection University of Gothenburg (CCUG) (CCUG 28807)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
100534Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID57223.1