Strain identifier
BacDive ID: 14545
Type strain: 
Species: Staphylococcus haemolyticus
Strain history: <- K.H. Schleifer <- W.E. Kloos, RM 422
NCBI tax ID(s): 1283 (species)
version 8.1 (current version)
General
@ref: 8673
BacDive-ID: 14545
DSM-Number: 20264
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, Gram-positive, human pathogen
description: Staphylococcus haemolyticus DSM 20264 is a mesophilic, Gram-positive human pathogen that was isolated from human skin.
NCBI tax id
- NCBI tax id: 1283
- Matching level: species
strain history
- @ref: 8673
- history: <- K.H. Schleifer <- W.E. Kloos, RM 422
doi: 10.13145/bacdive14545.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus haemolyticus
- full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975 (Approved Lists 1980)
@ref: 8673
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus haemolyticus
full scientific name: Staphylococcus haemolyticus Schleifer and Kloos 1975
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 100
Culture and growth conditions
culture medium
- @ref: 8673
- name: CORYNEBACTERIUM AGAR (DSMZ Medium 53)
- growth: yes
- link: https://mediadive.dsmz.de/medium/53
- composition: Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
culture temp
- @ref: 8673
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.782 |
murein
- @ref: 8673
- murein short key: A11.03
- type: A3alpha L-Lys-Gly2-4-L-Ser1-2-Gly
Isolation, sampling and environmental information
isolation
- @ref: 8673
- sample type: human skin
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Organ | #Skin, Nail, Hair |
Safety information
risk assessment
- @ref: 8673
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Staphylococcus haemolyticus strain DSM 20264 16S ribosomal RNA gene, partial sequence
- accession: AY688061
- length: 464
- database: ena
- NCBI tax ID: 1283
Genome sequences
- @ref: 66792
- description: Staphylococcus haemolyticus strain FDAARGOS 1453
- accession: 1283.1009
- assembly level: complete
- database: patric
- NCBI tax ID: 1283
GC content
- @ref: 8673
- GC-content: 34.7
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 88.842 | no |
| gram-positive | yes | 91.323 | no |
| anaerobic | no | 99.199 | no |
| aerobic | yes | 90.85 | no |
| halophile | yes | 95.662 | no |
| spore-forming | no | 90.651 | no |
| thermophile | no | 99.725 | yes |
| glucose-util | yes | 88.867 | no |
| flagellated | no | 92.969 | no |
| glucose-ferment | yes | 82.355 | no |
External links
@ref: 8673
culture collection no.: DSM 20264, ATCC 29969, RM 422
straininfo link
- @ref: 83676
- straininfo: 46714
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 1612422 | A DNA-probe for the detection of the species Staphylococcus haemolyticus. | Akatova E, Schumacher-Perdreau F, Pulverer G | FEMS Microbiol Lett | 10.1016/0378-1097(92)90495-a | 1992 | Cloning, Molecular, *DNA Probes, DNA, Bacterial/*genetics/isolation & purification, Nucleic Acid Hybridization, Species Specificity, Staphylococcus/genetics/*isolation & purification | Enzymology |
| Cultivation | 8067087 | [A molecular biology approach to the species identification of coagulase-negative staphylococci]. | Akatova EA, Schumacher-Perdreau F, Pulverer G | Zh Mikrobiol Epidemiol Immunobiol | 1993 | Bacteriological Techniques, Chromosomes, Bacterial, *Coagulase, Culture Media, DNA Probes, DNA, Bacterial, Humans, Staphylococcus/*classification/genetics/isolation & purification | Pathogenicity |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 8673 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20264) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20264 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
| 83676 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID46714.1 | StrainInfo: A central database for resolving microbial strain identifiers |