Strain identifier

BacDive ID: 14525

Type strain: No

Species: Staphylococcus epidermidis

Strain Designation: NT 286

Strain history: <- F. Schumacher-Perdreau; NT 286

NCBI tax ID(s): 1282 (species)

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General

@ref: 1851

BacDive-ID: 14525

DSM-Number: 4851

keywords: Bacteria, human pathogen

description: Staphylococcus epidermidis NT 286 is a human pathogen that was isolated from blood culture of sepsis patient.

NCBI tax id

  • NCBI tax id: 1282
  • Matching level: species

strain history

  • @ref: 1851
  • history: <- F. Schumacher-Perdreau; NT 286

doi: 10.13145/bacdive14525.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus epidermidis
  • full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Albococcus epidermidis

@ref: 1851

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus epidermidis

full scientific name: Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916

strain designation: NT 286

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
1851TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
1851COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

  • @ref: 1851
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea+hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837532528turanose+fermentation
6837522599arabinose-fermentation

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease+3.5.1.5

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
1851+---++-++-----++--+--+++--
1851+---+++++-----++--+-++-+--

Isolation, sampling and environmental information

isolation

  • @ref: 1851
  • sample type: blood culture of sepsis patient
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Infection#Disease
#Infection#Patient
#Infection#Patient#Blood culture

Safety information

risk assessment

  • @ref: 1851
  • pathogenicity human: yes
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 1851

culture collection no.: DSM 4851

straininfo link

  • @ref: 83656
  • straininfo: 407158

Reference

@idauthorscataloguedoi/urltitle
1851Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4851)https://www.dsmz.de/collection/catalogue/details/culture/DSM-4851
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
68375Automatically annotated from API ID32STA
83656Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID407158.1StrainInfo: A central database for resolving microbial strain identifiers