Strain identifier
version 8.1 (current version)
General
@ref: 48931
BacDive-ID: 145150
keywords: Bacteria, aerobe, mesophilic
description: Plesiomonas shigelloides CCUG 27761 is an aerobe, mesophilic bacterium that was isolated from Human feces,32-yr-old woman,diarrhea.
NCBI tax id
- NCBI tax id: 703
- Matching level: species
doi: 10.13145/bacdive145150.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Plesiomonas
- species: Plesiomonas shigelloides
- full scientific name: Plesiomonas shigelloides corrig. (Bader 1954) Habs and Schubert 1962 (Approved Lists 1980)
synonyms
@ref synonym 20215 Pseudomonas shigelloides 20215 Pleisomonas shigelloides
@ref: 48931
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacterales, not assigned to family
genus: Plesiomonas
species: Plesiomonas shigelloides
type strain: no
Culture and growth conditions
culture temp
- @ref: 48931
- growth: positive
- type: growth
- temperature: 30-37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 48931
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | + | fermentation |
68368 | 17992 | sucrose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | + | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | + | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | + | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | + | degradation |
68368 | 25094 | lysine | + | degradation |
68368 | 29016 | arginine | + | hydrolysis |
68374 | 18257 | ornithine | + | degradation |
68374 | 29016 | arginine | + | hydrolysis |
68374 | 25094 | lysine | + | degradation |
68374 | 16199 | urea | - | hydrolysis |
68374 | 18403 | L-arabitol | - | builds acid from |
68374 | 18024 | D-galacturonic acid | - | builds acid from |
68374 | Potassium 5-ketogluconate | - | builds acid from | |
68374 | 16899 | D-mannitol | - | builds acid from |
68374 | 17306 | maltose | + | builds acid from |
68374 | 15963 | ribitol | - | builds acid from |
68374 | 18394 | palatinose | - | builds acid from |
68374 | 15792 | malonate | - | assimilation |
68374 | 27897 | tryptophan | + | energy source |
68374 | 17634 | D-glucose | + | builds acid from |
68374 | 17992 | sucrose | - | builds acid from |
68374 | 30849 | L-arabinose | - | builds acid from |
68374 | 18333 | D-arabitol | - | builds acid from |
68374 | 27082 | trehalose | + | builds acid from |
68374 | 62345 | L-rhamnose | - | builds acid from |
68374 | 17268 | myo-inositol | - | builds acid from |
68374 | 17057 | cellobiose | - | builds acid from |
68374 | 30911 | sorbitol | - | builds acid from |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68374 | 35581 | indole | yes |
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | yes |
68368 | 16136 | hydrogen sulfide | no |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test |
---|---|---|---|---|
68374 | 35581 | indole | + | |
68368 | 15688 | acetoin | - | |
68368 | 35581 | indole | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68374 | L-aspartate arylamidase | - | 3.4.11.21 |
68374 | alpha-maltosidase | - | |
68374 | alpha-galactosidase | + | 3.2.1.22 |
68374 | alpha-glucosidase | + | 3.2.1.20 |
68374 | beta-galactosidase | + | 3.2.1.23 |
68374 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68374 | beta-glucuronidase | - | 3.2.1.31 |
68374 | beta-glucosidase | + | 3.2.1.21 |
68374 | lipase | - | |
68374 | urease | - | 3.5.1.5 |
68374 | lysine decarboxylase | + | 4.1.1.18 |
68374 | arginine dihydrolase | + | 3.5.3.6 |
68374 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | cytochrome oxidase | + | 1.9.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | lysine decarboxylase | + | 4.1.1.18 |
68368 | arginine dihydrolase | + | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 48931 C12:0 4.6 12 48931 C14:0 3.5 14 48931 C16:0 30.2 16 48931 C17:0 0.4 17 48931 C18:0 1 18 48931 C12:0 3OH 2.8 13.455 48931 C13:0 ISO 2OH 0.6 13.814 48931 C14:0 3OH/C16:1 ISO I 3.2 15.485 48931 C16:1 ω5c 0.4 15.908 48931 C16:1 ω7c 32.5 15.819 48931 C16:1 ω9c 1.8 15.774 48931 C17:0 CYCLO 8.4 16.888 48931 C17:1 ω8c 0.5 16.792 48931 C18:1 ω7c /12t/9t 8 17.824 48931 C18:1 ω9c 1.5 17.769 48931 C18:2 ω6,9c/C18:0 ANTE 0.4 17.724 48931 unknown 12.486 0.4 12.486 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
48931 | + | + | + | + | - | - | - | - | + | - | - | + | - | + | - | - | - | + | - | - | + |
API ID32E
@ref | ODC | ADH Arg | LDC Lys | URE | LARL | GAT | 5KG | LIP | RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | beta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alphaMAL | AspA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
48931 | + | + | + | - | - | - | - | - | + | + | - | + | - | - | - | - | + | + | + | + | - | - | - | + | + | + | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 48931
- sample type: Human feces,32-yr-old woman,diarrhea
- sampling date: 1991-01-07
- country: Malaysia
- origin.country: MYS
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | #Female |
#Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
#Infection | #Disease | |
#Infection | #Patient |
External links
@ref: 48931
culture collection no.: CCUG 27761
straininfo link
- @ref: 100224
- straininfo: 56296
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
48931 | Curators of the CCUG | https://www.ccug.se/strain?id=27761 | Culture Collection University of Gothenburg (CCUG) (CCUG 27761) | |
68368 | Automatically annotated from API 20E | |||
68374 | Automatically annotated from API ID32E | |||
100224 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID56296.1 |