Archive BacDiveID:10.13145/bacdive144737.20230509.8.1

Strain identifier

BacDive ID: 144737

Type strain:

Species: Haemophilus paraphrohaemolyticus

NCBI tax ID(s): 736 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 48450

BacDive-ID: 144737

keywords: genome sequence, Bacteria, microaerophile, mesophilic, Gram-negative

description: Haemophilus paraphrohaemolyticus CCUG 26425 is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from Human sputum,chest infection.

NCBI tax id

NCBI tax id: 736
Matching level: species

doi: 10.13145/bacdive144737.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Haemophilus
species: Haemophilus paraphrohaemolyticus
full scientific name: Haemophilus paraphrohaemolyticus Zinnemann et al. 1971 (Approved Lists 1980)

@ref: 48450

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Haemophilus

species: Haemophilus paraphrohaemolyticus

type strain: no

Morphology

cell morphology

@ref: 69480
gram stain: negative
confidence: 99.971

Culture and growth conditions

culture temp

@ref: 48450
growth: positive
type: growth
temperature: 37
range: mesophilic

Physiology and metabolism

oxygen tolerance

@ref: 48450
oxygen tolerance: microaerophile

spore formation

@ref	spore formation	confidence
69480	no	99.99
69481	no	100

Isolation, sampling and environmental information

isolation

@ref: 48450
sample type: Human sputum,chest infection

isolation source categories

Cat1	Cat2	Cat3
#Host	#Human
#Infection	#Patient
#Host Body Product	#Fluids	#Sputum
#Host Body-Site	#Other	#Torso

Sequence information

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Haemophilus paraphrohaemolyticus NCTC10671	GCA_900451065	contig	ncbi	736
66792	Haemophilus parahaemolyticus strain NCTC10671	735.10	wgs	patric	735

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	100	no
motile	no	92.096	no
flagellated	no	93.946	no
gram-positive	no	98.501	no
anaerobic	no	96.854	yes
aerobic	no	95.197	yes
halophile	no	55.424	no
spore-forming	no	98.558	no
thermophile	no	97.396	yes
glucose-util	no	53.833	no
glucose-ferment	no	50.686	no

External links

@ref: 48450

culture collection no.: CCUG 26425, MCCM 00470, ATCC 29238, NCTC 10671

straininfo link

@ref: 99878
straininfo: 39425

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
48450	Curators of the CCUG		https://www.ccug.se/strain?id=26425	Culture Collection University of Gothenburg (CCUG) (CCUG 26425)
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69481	Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch	Predictions based on the model GenomeNet Sporulation v. 1	10.21203/rs.3.rs-2527258/v1
99878	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID39425.1