Strain identifier
version 9 (current version)
General
@ref: 48389
BacDive-ID: 144687
keywords: Bacteria, anaerobe
description: Cutibacterium avidum CCUG 26212 is an anaerobe bacterium that was isolated from Human nasopharynx,paper mill worker.
NCBI tax id
- NCBI tax id: 33010
- Matching level: species
doi: 10.13145/bacdive144687.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Propionibacteriaceae
- genus: Cutibacterium
- species: Cutibacterium avidum
- full scientific name: Cutibacterium avidum (Eggerth 1935) Scholz and Kilian 2016
synonyms
@ref synonym 20215 Bacteroides avidus 20215 Propionibacterium avidum
@ref: 48389
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Propionibacteriales
family: Propionibacteriaceae
genus: Cutibacterium
species: Cutibacterium avidum
type strain: no
Culture and growth conditions
culture temp
- @ref: 48389
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 48389 | anaerobe |
| 48389 | microaerophile |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68379 | 17632 | nitrate | - | reduction |
| 68379 | 4853 | esculin | - | hydrolysis |
| 68379 | 16199 | urea | - | hydrolysis |
| 68379 | 5291 | gelatin | + | hydrolysis |
| 68379 | 16988 | D-ribose | + | fermentation |
| 68379 | 65327 | D-xylose | + | fermentation |
| 68379 | 16899 | D-mannitol | - | fermentation |
| 68379 | 17716 | lactose | - | fermentation |
| 68379 | 17992 | sucrose | + | fermentation |
| 68379 | 28087 | glycogen | - | fermentation |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68379 | catalase | - | 1.11.1.6 |
| 68379 | gelatinase | + | |
| 68379 | urease | - | 3.5.1.5 |
| 68379 | beta-glucosidase | - | 3.2.1.21 |
| 68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
| 68379 | alpha-glucosidase | + | 3.2.1.20 |
| 68379 | beta-galactosidase | + | 3.2.1.23 |
| 68379 | beta-glucuronidase | - | 3.2.1.31 |
| 68379 | alkaline phosphatase | - | 3.1.3.1 |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68379 | pyrazinamidase | - | 3.5.1.B15 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 48389 C15:0 8.2 15 48389 C16:0 4.5 16 48389 C17:0 1.7 17 48389 C18:0 2 18 48389 C14:0 3OH/C16:1 ISO I 1.5 15.485 48389 C14:0 ISO 3OH 2.4 15.117 48389 C15:0 ANTEISO 7.7 14.711 48389 C15:0 ISO 50.7 14.621 48389 C16:0 iso 2 15.626 48389 C17:0 anteiso 1.5 16.722 48389 C17:0 iso 10.8 16.629 48389 C18:1 ω9c 3.1 17.769 48389 C18:2 ω6,9c/C18:0 ANTE 3.1 17.724 48389 unknown 13.566 0.8 13.566 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
| @ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | RIB | XYL | MAN | LAC | SAC | GLYG | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48389 | - | - | - | - | - | + | + | + | - | - | + | - | + | + | - | - | + | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 48389
- sample type: Human nasopharynx,paper mill worker
- sampling date: 1990-02-01
- geographic location: Halmstad
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Oral cavity and airways | #Throat |
| #Infection | #Patient |
External links
@ref: 48389
culture collection no.: CCUG 26212
straininfo link
- @ref: 99836
- straininfo: 8637
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 48389 | Curators of the CCUG | https://www.ccug.se/strain?id=26212 | Culture Collection University of Gothenburg (CCUG) (CCUG 26212) | |
| 68379 | Automatically annotated from API Coryne | |||
| 99836 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID8637.1 |