Strain identifier

BacDive ID: 14441

Type strain: Yes

Species: Staphylococcus arlettae

Strain Designation: BP 47

Strain history: CIP <- 1995, N. El Solh, Inst. Pasteur, Paris, France <- K.H. Schleifer <- L.A. Devriese: strain BP 47

NCBI tax ID(s): 29378 (species)

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General

@ref: 8994

BacDive-ID: 14441

DSM-Number: 20672

keywords: 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-positive, coccus-shaped

description: Staphylococcus arlettae BP 47 is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from skin of poultry.

NCBI tax id

  • NCBI tax id: 29378
  • Matching level: species

strain history

@refhistory
8994<- K.H. Schleifer <- L.A. Devriese, BP 47
116497CIP <- 1995, N. El Solh, Inst. Pasteur, Paris, France <- K.H. Schleifer <- L.A. Devriese: strain BP 47

doi: 10.13145/bacdive14441.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus arlettae
  • full scientific name: Staphylococcus arlettae Schleifer et al. 1985

@ref: 8994

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus arlettae

full scientific name: Staphylococcus arlettae Schleifer et al. 1985

strain designation: BP 47

type strain: yes

Morphology

cell morphology

  • @ref: 116497
  • gram stain: positive
  • cell shape: coccus-shaped
  • motility: no

colony morphology

@reftype of hemolysisincubation periodhemolysis ability
8994gamma1-2 days
1164971

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8994COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8994TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
34292MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
116497CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
8994positivegrowth37mesophilic
34292positivegrowth37mesophilic
116497positivegrowth15psychrophilic
116497nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 116497
  • oxygen tolerance: obligate aerobe

murein

  • @ref: 8994
  • murein short key: A11.02
  • type: A3alpha L-Lys-Gly5-6

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371inulin-builds acid from15443
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-glucose+builds acid from17634
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371L-arabinose+builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
116497nitrate-reduction17632
116497nitrite-reduction16301
116497tributyrin-hydrolysis35020
68375urea-hydrolysis16199
68375arginine-hydrolysis29016
68375ornithine-degradation18257
68375esculin-hydrolysis4853
68375D-glucose+fermentation17634
68375D-fructose+fermentation15824
68375D-mannose-fermentation16024
68375maltose+fermentation17306
68375lactose+fermentation17716
68375trehalose+fermentation27082
68375D-mannitol+fermentation16899
68375sucrose+fermentation17992
68375turanose-fermentation32528

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is resistant: yes
  • resistance conc.: 1.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837515688acetoinno
11649735581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837515688acetoin-
11649715688acetoin-

enzymes

@refvalueactivityec
8994catalase+1.11.1.6
8994cytochrome-c oxidase-1.9.3.1
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase+3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease-3.5.1.5
116497oxidase-
116497beta-galactosidase+3.2.1.23
116497alcohol dehydrogenase-1.1.1.1
116497gelatinase+/-
116497DNase-
116497catalase+1.11.1.6
116497coagulase-
116497lecithinase-
116497lysine decarboxylase-4.1.1.18
116497ornithine decarboxylase-4.1.1.17
116497urease-3.5.1.5

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
116497+/---++/-+/----+/-++/------+/-------+/---+/-+/--++/--+/-----+/-+/-------+/---

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
8994----++-+++++/-+---+---++--++/-
8994----++-++++-+-+-+---+++-++
8994----++-+++++/-+/-+--+---++--+/-+/-

Isolation, sampling and environmental information

isolation

@refsample type
8994skin of poultry
51005Poultry skin
116497Animal, Poultry, skin

isolation source categories

Cat1Cat2Cat3
#Host#Birds
#Host Body-Site#Organ#Skin, Nail, Hair

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
89941Risk group (German classification)
1164971Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Staphylococcus arlettae strain DSM 20672 16S ribosomal RNA gene, partial sequenceAY688029464ena29378
8994Staphylococcus arlettae rrn gene for 16S ribosomal RNAAB0099331494ena29378

GC content

  • @ref: 8994
  • GC-content: 32.6

External links

@ref: 8994

culture collection no.: CCUG 32416, DSM 20672, ATCC 43957, CIP 103501

straininfo link

  • @ref: 83584
  • straininfo: 92624

literature

  • topic: Phylogeny
  • Pubmed-ID: 14657137
  • title: Staphylococcus nepalensis sp. nov., isolated from goats of the Himalayan region.
  • authors: Spergser J, Wieser M, Taubel M, Rossello-Mora RA, Rosengarten R, Busse HJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.02646-0
  • year: 2003
  • mesh: Altitude, Animals, DNA Fingerprinting, Geography, Goats/*microbiology, India, Microbial Sensitivity Tests, Molecular Sequence Data, *Phylogeny, Polymerase Chain Reaction, Staphylococcus/*classification/genetics/isolation & purification/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8994Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20672)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20672
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
34292Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15305
51005Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 32416)https://www.ccug.se/strain?id=32416
68371Automatically annotated from API 50CH acid
68375Automatically annotated from API ID32STA
83584Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92624.1StrainInfo: A central database for resolving microbial strain identifiers
116497Curators of the CIPCollection of Institut Pasteur (CIP 103501)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103501