Strain identifier
version 8.1 (current version)
General
@ref: 47815
BacDive-ID: 144196
keywords: Bacteria
description: Nicoletella semolina CCUG 23468 is a bacterium that was isolated from Equine guttural pouch,11-yr-old riding horse.
NCBI tax id
- NCBI tax id: 271160
- Matching level: species
doi: 10.13145/bacdive144196.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Nicoletella
- species: Nicoletella semolina
- full scientific name: Nicoletella semolina Kuhnert et al. 2005
@ref: 47815
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Nicoletella
species: Nicoletella semolina
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68377 | 17634 | D-glucose | + | builds acid from |
68377 | 15824 | D-fructose | + | builds acid from |
68377 | 17306 | maltose | + | builds acid from |
68377 | 17992 | sucrose | + | builds acid from |
68377 | 18257 | ornithine | - | degradation |
68377 | 16199 | urea | + | hydrolysis |
68377 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68377 | tryptophan deaminase | - | 4.1.99.1 |
68377 | gamma-glutamyltransferase | - | 2.3.2.2 |
68377 | proline-arylamidase | - | 3.4.11.5 |
68377 | beta-galactosidase | - | 3.2.1.23 |
68377 | alkaline phosphatase | - | 3.1.3.1 |
68377 | lipase | - | |
68377 | urease | + | 3.5.1.5 |
68377 | ornithine decarboxylase | - | 4.1.1.17 |
68377 | beta-lactamase | - | 3.5.2.6 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
fatty acid profile
@ref fatty acid percentage ECL 47815 C12:0 2.3 12 47815 C14:0 15.9 14 47815 C16:0 31.2 16 47815 C18:0 2.1 18 47815 C13:0 ISO 2OH 1 13.814 47815 C14:0 3OH/C16:1 ISO I 8.2 15.485 47815 C16:1 ω7c 23.3 15.819 47815 C18:1 ω7c /12t/9t 4.3 17.824 47815 C18:1 ω9c 3.4 17.769 47815 C18:2 ω6,9c/C18:0 ANTE 6.9 17.724 47815 unknown 13.961 0.8 13.961 47815 unknown 14.503 0.6 14.503 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
@ref fatty acid percentage ECL 47815 C12:0 2.7 12 47815 C14:0 16.6 14 47815 C16:0 28.1 16 47815 C18:0 1.6 18 47815 C12:0 ALDE ? 0.5 10.915 47815 C13:0 ISO 2OH 1.5 13.814 47815 C14:0 3OH/C16:1 ISO I 7.4 15.485 47815 C16:1 ω7c 29.2 15.819 47815 C18:1 ω7c /12t/9t 3.9 17.824 47815 C18:1 ω9c 3.5 17.769 47815 C18:2 ω6,9c/C18:0 ANTE 5 17.724 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
@ref fatty acid percentage ECL 47815 C12:0 2 12 47815 C14:0 12.4 14 47815 C16:0 32.1 16 47815 C18:0 2.7 18 47815 C12:0 ALDE ? 1.5 10.915 47815 C13:0 ISO 2OH 1.2 13.814 47815 C14:0 3OH/C16:1 ISO I 5.7 15.485 47815 C16:1 ω7c 27.1 15.819 47815 C18:1 ω7c /12t/9t 5.9 17.824 47815 C18:1 ω9c 2.8 17.769 47815 C18:2 ω6,9c/C18:0 ANTE 6.6 17.724 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
47815 | - | + | + | + | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - |
47815 | - | + | - | - | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - |
47815 | - | + | - | + | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - |
API NH
@ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
47815 | - | + | + | + | + | - | + | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 47815
- sample type: Equine guttural pouch,11-yr-old riding horse
- sampling date: 1988-11-09
- geographic location: Uppsala
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Mammals | #Equidae (Horse) |
#Host Body-Site | #Oral cavity and airways |
External links
@ref: 47815
culture collection no.: CCUG 23468, MCCM 00056
straininfo link
- @ref: 99433
- straininfo: 53380
Reference
@id | authors | title | doi/url | catalogue | journal | pubmed |
---|---|---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
47815 | Curators of the CCUG | https://www.ccug.se/strain?id=23468 | Culture Collection University of Gothenburg (CCUG) (CCUG 23468) | |||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
68377 | Automatically annotated from API NH | |||||
68382 | Automatically annotated from API zym | |||||
99433 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID53380.1 |