Strain identifier

BacDive ID: 143981

Type strain: No

Species: Actinobacillus lignieresii

NCBI tax ID(s): 720 (species)

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General

@ref: 47584

BacDive-ID: 143981

keywords: genome sequence, Bacteria, aerobe, mesophilic

description: Actinobacillus lignieresii CCUG 22229 is an aerobe, mesophilic bacterium that was isolated from Horse,cavum oris.

NCBI tax id

  • NCBI tax id: 720
  • Matching level: species

doi: 10.13145/bacdive143981.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Actinobacillus
  • species: Actinobacillus lignieresii
  • full scientific name: Actinobacillus lignieresii Brumpt 1910 (Approved Lists 1980)

@ref: 47584

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Actinobacillus

species: Actinobacillus lignieresii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 47584
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 47584
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea+hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease+3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
47584-+--------++-+------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
47584-++++-+-++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 47584
  • sample type: Horse,cavum oris
  • country: Denmark
  • origin.country: DNK
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Equidae (Horse)
#Host Body-Site#Oral cavity and airways#Mouth

Sequence information

Genome sequences

  • @ref: 66792
  • description: Actinobacillus genomosp. 1 CCUG22229
  • accession: GCA_029773645
  • assembly level: complete
  • database: ncbi
  • NCBI tax ID: 254839

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno90.236no
flagellatedno93.717no
gram-positiveno91.426no
anaerobicno92.995yes
aerobicno69.941yes
halophileno64.293no
spore-formingno97.832no
glucose-fermentyes83.393no
thermophileno95.943no
glucose-utilyes81.624no

External links

@ref: 47584

culture collection no.: CCUG 22229

straininfo link

  • @ref: 99245
  • straininfo: 97615

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
47584Curators of the CCUGhttps://www.ccug.se/strain?id=22229Culture Collection University of Gothenburg (CCUG) (CCUG 22229)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68377Automatically annotated from API NH
68382Automatically annotated from API zym
99245Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID97615.1