Strain identifier
version 8.1 (current version)
General
@ref: 47080
BacDive-ID: 143538
keywords: Bacteria, microaerophile, mesophilic
description: Capnocytophaga cynodegmi CCUG 19954 is a microaerophile, mesophilic bacterium that was isolated from Dog pharynx.
NCBI tax id
- NCBI tax id: 28189
- Matching level: species
doi: 10.13145/bacdive143538.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Capnocytophaga
- species: Capnocytophaga cynodegmi
- full scientific name: Capnocytophaga cynodegmi Brenner et al. 1990
@ref: 47080
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Capnocytophaga
species: Capnocytophaga cynodegmi
type strain: no
Culture and growth conditions
culture temp
- @ref: 47080
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 47080
- oxygen tolerance: microaerophile
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 47080 C14:0 2.1 14 47080 C15:0 0.1 15 47080 C16:0 2.9 16 47080 C18:0 0.7 18 47080 C13:0 iso 2.1 12.612 47080 C13:1 at 12-13 1.8 12.931 47080 C15:0 ANTEISO 2.4 14.711 47080 C15:0 ISO 57.2 14.621 47080 C15:0 ISO 3OH 3.5 16.135 47080 C16:0 3OH 6.2 17.52 47080 C16:0 iso 0.2 15.626 47080 C17:0 iso 0.4 16.629 47080 C17:0 iso 3OH 11.9 18.161 47080 C18:1 2OH 0.3 19.088 47080 C18:1 ω9c 1.2 17.769 47080 C18:2 ω6,9c/C18:0 ANTE 2 17.724 47080 unknown 13.566 3.7 13.566 47080 unknown 16.580 0.5 16.58 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 47080
- sample type: Dog pharynx
- sampling date: 1987
- geographic location: Uppsala
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Canidae (Dog) |
| #Host Body-Site | #Oral cavity and airways |
External links
@ref: 47080
culture collection no.: CCUG 19954
straininfo link
- @ref: 98888
- straininfo: 215351
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 47080 | Curators of the CCUG | https://www.ccug.se/strain?id=19954 | Culture Collection University of Gothenburg (CCUG) (CCUG 19954) | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 98888 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID215351.1 |