Strain identifier

BacDive ID: 143383

Type strain: No

Species: Rhodococcus hoagii

NCBI tax ID(s): 43767 (species)

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General

@ref: 46901

BacDive-ID: 143383

description: Rhodococcus hoagii CCUG 18812 is a prokaryote that was isolated from Human.

NCBI tax id

  • NCBI tax id: 43767
  • Matching level: species

doi: 10.13145/bacdive143383.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • genus: Rhodococcus
  • species: Rhodococcus hoagii
  • full scientific name: Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014

  • synonyms

    @refsynonym
    20215Bacillus hoagii
    20215Corynebacterium hoagii

@ref: 46901

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Rhodococcus

species: Rhodococcus hoagii

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    46901C14:05.114
    46901C16:032.716
    46901C18:02.118
    46901C16:0 10-methyl4.116.433
    46901C16:1 ω7c4.815.819
    46901C16:1 ω7c/C15:0 ISO 2OH9.715.85
    46901C17:1 ω8c116.792
    46901C18:1 ω9c7.817.769
    46901C18:2 ω6,9c/C18:0 ANTE9.317.724
    46901C20:4 ω6,9,12,15c119.395
    46901TBSA 10Me18:08.818.392
    46901Unidentified110.166
    46901Unidentified3.314.955
    46901Unidentified8.316.976
    46901Unidentified0.918.741
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
46901++-+--+-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
46901-+---++---++--------

Isolation, sampling and environmental information

isolation

  • @ref: 46901
  • sample type: Human
  • sampling date: 1986-04-15
  • geographic location: Uppsala
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Host
  • Cat2: #Human

External links

@ref: 46901

culture collection no.: CCUG 18812

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
46901Curators of the CCUGhttps://www.ccug.se/strain?id=18812Culture Collection University of Gothenburg (CCUG) (CCUG 18812)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym