Strain identifier
version 8.1 (current version)
General
@ref: 45950
BacDive-ID: 142628
keywords: Bacteria
description: Capnocytophaga ochracea CCUG 13425 is a bacterium of the family Flavobacteriaceae.
NCBI tax id
- NCBI tax id: 1018
- Matching level: species
doi: 10.13145/bacdive142628.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Capnocytophaga
- species: Capnocytophaga ochracea
- full scientific name: Capnocytophaga ochracea (Prévot et al. 1956) Leadbetter et al. 1982
synonyms
- @ref: 20215
- synonym: Bacteroides ochraceus
@ref: 45950
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Capnocytophaga
species: Capnocytophaga ochracea
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68377 | 17634 | D-glucose | + | builds acid from |
| 68377 | 15824 | D-fructose | + | builds acid from |
| 68377 | 17306 | maltose | + | builds acid from |
| 68377 | 17992 | sucrose | + | builds acid from |
| 68377 | 18257 | ornithine | - | degradation |
| 68377 | 16199 | urea | - | hydrolysis |
| 68377 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68377 | tryptophan deaminase | - | 4.1.99.1 |
| 68377 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68377 | proline-arylamidase | + | 3.4.11.5 |
| 68377 | beta-galactosidase | + | 3.2.1.23 |
| 68377 | alkaline phosphatase | + | 3.1.3.1 |
| 68377 | lipase | + | |
| 68377 | urease | - | 3.5.1.5 |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 |
| 68377 | beta-lactamase | - | 3.5.2.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 45950 C14:0 0.5 14 45950 C16:0 1.9 16 45950 C18:0 0.9 18 45950 C13:0 iso 0.9 12.612 45950 C13:1 at 12-13 1.2 12.931 45950 C15:0 ANTEISO 1.4 14.711 45950 C15:0 ISO 64.5 14.621 45950 C15:0 ISO 3OH 2 16.135 45950 C16:0 3OH 2.3 17.52 45950 C17:0 iso 3OH 12.1 18.161 45950 C18:1 ω9c 1.3 17.769 45950 C18:2 ω6,9c/C18:0 ANTE 1.9 17.724 45950 unknown 13.566 8.1 13.566 45950 unknown 16.580 1.1 16.58 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API NH
| @ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45950 | - | + | + | + | + | - | - | + | + | + | + | - | - |
External links
@ref: 45950
culture collection no.: CCUG 13425
straininfo link
- @ref: 98096
- straininfo: 52538
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45950 | Curators of the CCUG | https://www.ccug.se/strain?id=13425 | Culture Collection University of Gothenburg (CCUG) (CCUG 13425) | |
| 68377 | Automatically annotated from API NH | |||
| 98096 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52538.1 |