Strain identifier
version 8.1 (current version)
General
@ref: 45638
BacDive-ID: 142361
keywords: genome sequence, Bacteria
description: Streptococcus agalactiae CCUG 12037 is a bacterium of the family Streptococcaceae.
NCBI tax id
- NCBI tax id: 1311
- Matching level: species
doi: 10.13145/bacdive142361.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Streptococcus
- species: Streptococcus agalactiae
- full scientific name: Streptococcus agalactiae Lehmann and Neumann 1896 (Approved Lists 1980)
synonyms
@ref synonym 20215 Streptococcus difficile 20215 Streptococcus difficilis
@ref: 45638
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus agalactiae
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 93.608 | |
| 69480 | 100 | positive |
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.991 |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptococcus agalactiae NCTC11360 | GCA_900459085 | contig | ncbi | 1311 |
| 66792 | Streptococcus agalactiae strain NCTC11360 | 1311.1754 | wgs | patric | 1311 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 96.952 | no |
| gram-positive | yes | 92.933 | no |
| anaerobic | no | 93.045 | no |
| halophile | yes | 88.128 | no |
| spore-forming | no | 95.274 | no |
| glucose-util | yes | 90.473 | no |
| aerobic | no | 95.759 | no |
| flagellated | no | 98.495 | no |
| thermophile | no | 99.505 | no |
| glucose-ferment | yes | 89.153 | no |
External links
@ref: 45638
culture collection no.: CCUG 12037, NCTC 11360
straininfo link
- @ref: 97896
- straininfo: 57436
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45638 | Curators of the CCUG | https://www.ccug.se/strain?id=12037 | Culture Collection University of Gothenburg (CCUG) (CCUG 12037) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 97896 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID57436.1 |