Strain identifier
version 8.1 (current version)
General
@ref: 45346
BacDive-ID: 142108
keywords: Bacteria
description: Campylobacter coli CCUG 10939 is a bacterium that was isolated from Sheep feces &).
NCBI tax id
- NCBI tax id: 195
- Matching level: species
doi: 10.13145/bacdive142108.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Campylobacteraceae
- genus: Campylobacter
- species: Campylobacter coli
- full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)
synonyms
@ref synonym 20215 Vibrio coli 20215 Campylobacter hyoilei
@ref: 45346
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Campylobacteraceae
genus: Campylobacter
species: Campylobacter coli
type strain: no
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 17632 | nitrate | + | reduction |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | + | reduction |
| 68373 | 17634 | D-glucose | - | assimilation |
| 68373 | 30031 | succinate | + | assimilation |
| 68373 | 30089 | acetate | + | assimilation |
| 68373 | 17272 | propionate | + | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
antibiotic resistance
| @ref | ChEBI | metabolite | is antibiotic | is resistant | resistance conc. | is sensitive | sensitivity conc. |
|---|---|---|---|---|---|---|---|
| 68373 | 48923 | erythromycin | yes | yes | 14 µg | ||
| 68373 | 474053 | cefazolin | yes | yes | 224 µg | ||
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
metabolite production
- @ref: 68373
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: no
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68373 | catalase | + | 1.11.1.6 |
| 68373 | alkaline phosphatase | + | 3.1.3.1 |
| 68373 | L-aspartate arylamidase | - | 3.4.11.21 |
| 68373 | L-arginine arylamidase | + | |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68373 | esterase | - | |
| 68373 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 45346 C14:0 7.5 14 45346 C15:0 0.2 15 45346 C16:0 40 16 45346 C18:0 0.4 18 45346 C12:0 ALDE ? 0.3 10.915 45346 C13:0 ISO 2OH 0.2 13.814 45346 C14:0 3OH/C16:1 ISO I 3.8 15.485 45346 C16:1 ω5c 0.3 15.908 45346 C16:1 ω7c 3.7 15.819 45346 C17:0 CYCLO 0.7 16.888 45346 C18:1 ω7c /12t/9t 25.4 17.824 45346 C18:2 ω6,9c/C18:0 ANTE 0.4 17.724 45346 C19:0 CYCLO ω8c 16.7 18.9 45346 C20:2 ω6,9c 0.2 19.735 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API CAM
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45346 | - | + | - | - | - | + | - | + | - | + | - | - | + | - | - | + | + | - | - | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 45346
- sample type: Sheep feces &)
- geographic location: Ontario,Guelph &)
- country: Canada
- origin.country: CAN
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
External links
@ref: 45346
culture collection no.: CCUG 10939
straininfo link
- @ref: 97676
- straininfo: 52187
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45346 | Curators of the CCUG | https://www.ccug.se/strain?id=10939 | Culture Collection University of Gothenburg (CCUG) (CCUG 10939) | |
| 68373 | Automatically annotated from API CAM | |||
| 97676 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52187.1 |