Archive BacDiveID:10.13145/bacdive141647.20230509.8.1

Strain identifier

BacDive ID: 141647

Type strain:

Species: Staphylococcus warneri

NCBI tax ID(s): 1292 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 44738

BacDive-ID: 141647

keywords: genome sequence, Bacteria, Gram-positive

description: Staphylococcus warneri CCUG 4320 is a Gram-positive bacterium that was isolated from Skin.

NCBI tax id

NCBI tax id: 1292
Matching level: species

doi: 10.13145/bacdive141647.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus warneri
full scientific name: Staphylococcus warneri Kloos and Schleifer 1975 (Approved Lists 1980)

@ref: 44738

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus warneri

type strain: no

Morphology

cell morphology

@ref: 69480
gram stain: positive
confidence: 100

Physiology and metabolism

spore formation

@ref	spore formation	confidence
69481	no	99
69480	no	98.806

fatty acid profile

fatty acids

@ref	fatty acid	percentage	ECL
44738	C16:0	1.1	16
44738	C18:0	3.2	18
44738	C20:0	1.2	20
44738	C14:0 ISO	0.5	13.618
44738	C15:0 ANTEISO	59.1	14.711
44738	C15:0 ISO	4.6	14.621
44738	C16:0 iso	0.5	15.626
44738	C17:0 anteiso	18.2	16.722
44738	C17:0 iso	5.3	16.629
44738	C18:0 ISO	0.4	17.632
44738	C18:2 ω6,9c/C18:0 ANTE	0.9	17.724
44738	C19:0 ANTEISO	4.8	18.729
44738	C19:0 ISO	1.2	18.633

type of FA analysis: whole cell analysis
method/protocol: CCUG

Isolation, sampling and environmental information

isolation

@ref: 44738
sample type: Skin
sampling date: 1935

isolation source categories

Cat1: #Host Body-Site
Cat2: #Organ
Cat3: #Skin, Nail, Hair

Sequence information

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Staphylococcus warneri NCTC7291	GCA_900636265	complete	ncbi	1292
66792	Staphylococcus warneri strain NCTC7291	1292.102	complete	patric	1292

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	99	no
flagellated	no	93.496	no
gram-positive	yes	90.919	no
anaerobic	no	99.368	no
aerobic	yes	90.351	no
halophile	yes	96.13	no
spore-forming	no	92.696	no
thermophile	no	99.798	no
glucose-util	yes	90.783	no
motile	no	90.734	no
glucose-ferment	yes	82.39	no

External links

@ref: 44738

culture collection no.: CCUG 4320, NCTC 7291

straininfo link

@ref: 97282
straininfo: 57311

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
44738	Curators of the CCUG		https://www.ccug.se/strain?id=4320	Culture Collection University of Gothenburg (CCUG) (CCUG 4320)
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69481	Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch	Predictions based on the model GenomeNet Sporulation v. 1	10.21203/rs.3.rs-2527258/v1
97282	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID57311.1