Strain identifier
version 8.1 (current version)
General
@ref: 44627
BacDive-ID: 141573
keywords: genome sequence, Bacteria, Gram-negative
description: Neisseria meningitidis CCUG 3272 is a Gram-negative bacterium of the family Neisseriaceae.
NCBI tax id
- NCBI tax id: 487
- Matching level: species
doi: 10.13145/bacdive141573.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Neisseriales
- family: Neisseriaceae
- genus: Neisseria
- species: Neisseria meningitidis
- full scientific name: Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Micrococcus meningitidis
@ref: 44627
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Neisseriales
family: Neisseriaceae
genus: Neisseria
species: Neisseria meningitidis
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.996
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 44627
- sampling date: 1955
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Neisseria meningitidis NCTC9714 | GCA_900454045 | contig | ncbi | 487 |
| 66792 | Neisseria meningitidis strain NCTC9714 | 487.2463 | wgs | patric | 487 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| gram-positive | no | 98.361 | no |
| anaerobic | no | 97.856 | no |
| halophile | no | 59.905 | no |
| spore-forming | no | 97.244 | no |
| glucose-util | yes | 67.002 | no |
| aerobic | no | 93.715 | no |
| thermophile | no | 98.914 | no |
| motile | no | 84.958 | no |
| glucose-ferment | no | 88.601 | no |
| flagellated | no | 91.289 | no |
External links
@ref: 44627
culture collection no.: CCUG 3272, ATCC 13113, NCTC 9714
straininfo link
- @ref: 97217
- straininfo: 35747
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44627 | Curators of the CCUG | https://www.ccug.se/strain?id=3272 | Culture Collection University of Gothenburg (CCUG) (CCUG 3272) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 97217 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID35747.1 |