Strain identifier

BacDive ID: 141459

Type strain: No

Species: Clostridium perfringens

NCBI tax ID(s): 1502 (species)

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General

@ref: 44464

BacDive-ID: 141459

keywords: Bacteria, anaerobe, mesophilic

description: Clostridium perfringens CCUG 2036 is an anaerobe, mesophilic bacterium that was isolated from Sheep,'struck'.

NCBI tax id

  • NCBI tax id: 1502
  • Matching level: species

doi: 10.13145/bacdive141459.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Clostridiaceae
  • genus: Clostridium
  • species: Clostridium perfringens
  • full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus perfringens

@ref: 44464

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Clostridiaceae

genus: Clostridium

species: Clostridium perfringens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 44464
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 44464
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine+hydrolysis
6838016024D-mannose+fermentation
6838016634raffinose+fermentation
6838029985L-glutamate+degradation
6838017632nitrate+reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380glycin arylamidase-
68380alanine arylamidase-3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase+3.4.19.3
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380leucyl glycin arylamidase-3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase+
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase+4.1.1.15
68380N-acetyl-beta-glucosaminidase+3.2.1.52
68380beta-glucuronidase+3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase+3.2.1.21
68380alpha-glucosidase+3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase+3.2.1.23
68380alpha-galactosidase+3.2.1.22
68380arginine dihydrolase+3.5.3.6
68380urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    44464C10:00.610
    44464C12:021.812
    44464C14:01414
    44464C16:05.316
    44464C18:05.718
    44464C19:01.419
    44464C20:03.420
    44464C13:0 3OH/C15:1 i I/H414.469
    44464C13:0 ISO 2OH1.513.814
    44464C13:1 at 12-130.912.931
    44464C16:0 aldehyde1.314.949
    44464C16:1 ω9c1.215.774
    44464C16:1 ω9c DMA1.116.242
    44464C17:0 CYCLO0.716.888
    44464C17:1 ISO I/C16:0 DMA8.216.481
    44464C18:1 ω9c1.317.769
    44464C18:2 ω6,9c/C18:0 ANTE4.217.724
    44464C19:0 CYCLO ω8c1.718.9
    44464C19:0 CYCLO ω9c1.918.87
    44464C19:1 ISO I9.318.473
    44464C20:1 ω7c2.319.833
    44464C20:1 ω9c1.619.77
    44464C20:2 ω6,9c1.919.735
    44464Unidentified0.812.473
    44464unknown 13.7660.713.766
    44464unknown 16.9721.816.972
    44464unknown 19.3201.519.32
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
44464-+++-++-+++++-+-++----+------

Isolation, sampling and environmental information

isolation

  • @ref: 44464
  • sample type: Sheep,'struck'
  • sampling date: 1930

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Other#Wound

External links

@ref: 44464

culture collection no.: CCUG 2036, NCTC 3180, CECT 820

straininfo link

  • @ref: 97130
  • straininfo: 52915

literature

  • topic: Biotechnology
  • Pubmed-ID: 33061221
  • title: Production, immunogenicity, stability, and safety of a vaccine against Clostridium perfringens beta toxins.
  • authors: Saadh MJ, Sa'adeh IJ, Dababneh MF, Almaaytah AM, Bayan MF
  • journal: Vet World
  • DOI: 10.14202/vetworld.2020.1517-1523
  • year: 2020

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
44464Curators of the CCUGhttps://www.ccug.se/strain?id=2036Culture Collection University of Gothenburg (CCUG) (CCUG 2036)
68380Automatically annotated from API rID32A
97130Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID52915.1