Strain identifier
version 9.1 (current version)
General
@ref: 44241
BacDive-ID: 141284
keywords: genome sequence, Bacteria, microaerophile, Gram-negative
description: Haemophilus aegyptius CCUG 628 is a microaerophile, Gram-negative bacterium of the family Pasteurellaceae.
NCBI tax id
- NCBI tax id: 197575
- Matching level: species
doi: 10.13145/bacdive141284.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Haemophilus
- species: Haemophilus aegyptius
- full scientific name: Haemophilus aegyptius corrig. (Trevisan 1889) Pittman and Davis 1950 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus aegyptius 20215 Hemophilus aegyptius
@ref: 44241
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Haemophilus
species: Haemophilus aegyptius
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 96.06 | |
| 69480 | 97.811 | negative |
Culture and growth conditions
culture temp
- @ref: 44241
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 44241
- oxygen tolerance: microaerophile
spore formation
- @ref: 69480
- spore formation: no
- confidence: 93.148
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Haemophilus aegyptius CCUG 628 | GCA_001679305 | scaffold | ncbi | 197575 |
| 66792 | Haemophilus aegyptius strain CCUG 628 | 197575.7 | wgs | patric | 197575 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.811 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 96.889 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 92.314 | yes |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 93.148 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 96 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 96.06 | no |
External links
@ref: 44241
culture collection no.: CCUG 628
straininfo link
- @ref: 96975
- straininfo: 54200
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44241 | Curators of the CCUG | https://www.ccug.se/strain?id=628 | Culture Collection University of Gothenburg (CCUG) (CCUG 628) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 96975 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID54200.1 |