Strain identifier
BacDive ID: 141218
Type strain: 
Species: Pseudomonas stutzeri
NCBI tax ID(s): 203192 (species), 316 (species)
version 7.1 (current version)
General
@ref: 44148
BacDive-ID: 141218
keywords: genome sequence, Bacteria
description: Pseudomonas stutzeri CCUG 227 is a bacterium that was isolated from Chronic leg ulcer.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 203192 | species |
| 316 | species |
doi: 10.13145/bacdive141218.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas stutzeri
- full scientific name: Pseudomonas stutzeri (Lehmann and Neumann 1896) Sijderius 1946 (Approved Lists 1980)
synonyms
@ref synonym 20215 Stutzerimonas chloritidismutans 20215 Pseudomonas perfectomarinus 20215 Bacterium stutzeri 20215 Pseudomonas kunmingensis 20215 Pseudomonas chloritidismutans 20215 Stutzerimonas kunmingensis 20215 Stutzerimonas stutzeri 20215 Stutzerimonas perfectomarina 20215 Pseudomonas perfectomarina
@ref: 44148
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas stutzeri
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 91.122 | |
| 69480 | 99.772 | negative |
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 96.893
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 89.818
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 44148 C10:0 0.2 10 44148 C12:0 7.3 12 44148 C14:0 0.9 14 44148 C16:0 18 16 44148 C18:0 0.4 18 44148 C10:0 3OH 3.2 11.423 44148 C11:0 ISO 3OH 0.9 12.09 44148 C12:0 2OH 0.1 13.178 44148 C12:0 3OH 3.4 13.455 44148 C16:1 ω7c 24.4 15.819 44148 C17:0 CYCLO 0.8 16.888 44148 C17:0 iso 0.4 16.629 44148 C18:1 ω7c /12t/9t 38.5 17.824 44148 C19:0 CYCLO ω8c 1.4 18.9 44148 unknown 11.798 0.2 11.798 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 44148
- sample type: Chronic leg ulcer
isolation source categories
- Cat1: #Host Body-Site
- Cat2: #Limb
- Cat3: #Leg
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Pseudomonas stutzeri NCTC10450 | GCA_900636845 | complete | ncbi | 316 |
| 66792 | Pseudomonas stutzeri strain NCTC10450 | 316.449 | complete | patric | 316 |
| 66792 | Pseudomonas stutzeri NCTC10450 | 2875531041 | complete | img | 316 |
| 66792 | Streptococcus pneumoniae 218229 | GCA_001135325 | contig | patric | 1313 |
External links
@ref: 44148
culture collection no.: CCUG 227, NCTC 10450
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44148 | Curators of the CCUG | https://www.ccug.se/strain?id=227 | Culture Collection University of Gothenburg (CCUG) (CCUG 227) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |