Strain identifier
version 8.1 (current version)
General
@ref: 44094
BacDive-ID: 141174
keywords: genome sequence, Bacteria, Gram-positive
description: Enterococcus faecium CCUG 14 is a Gram-positive bacterium that was isolated from Human.
NCBI tax id
- NCBI tax id: 1352
- Matching level: species
doi: 10.13145/bacdive141174.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Enterococcaceae
- genus: Enterococcus
- species: Enterococcus faecium
- full scientific name: Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984
synonyms
- @ref: 20215
- synonym: Streptococcus faecium
@ref: 44094
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Enterococcaceae
genus: Enterococcus
species: Enterococcus faecium
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 99.999
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.935
Isolation, sampling and environmental information
isolation
- @ref: 44094
- sample type: Human
- sampling date: 1968
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
- Cat1: #Host
- Cat2: #Human
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Enterococcus faecium LMG 8148 | GCA_001576665 | contig | ncbi | 1352 |
| 66792 | Enterococcus faecium strain LMG 8148 | 1352.768 | wgs | patric | 1352 |
| 66792 | Enterococcus faecium LMG 8148 | 2728369081 | draft | img | 1352 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 86 | no |
| motile | no | 92.662 | no |
| gram-positive | yes | 90.976 | no |
| anaerobic | no | 96.19 | no |
| halophile | yes | 93.327 | no |
| spore-forming | no | 88.174 | no |
| thermophile | no | 99.429 | no |
| glucose-util | yes | 87.569 | no |
| flagellated | no | 97.437 | no |
| aerobic | no | 95.514 | no |
| glucose-ferment | yes | 85.565 | no |
External links
@ref: 44094
culture collection no.: CCUG 14, LMG 8148, LMG 15878
straininfo link
- @ref: 96881
- straininfo: 8846
literature
- topic: Genetics
- Pubmed-ID: 27610213
- title: Draft genome sequence of Enterococcus faecium strain LMG 8148.
- authors: Michiels JE, Van den Bergh B, Fauvart M, Michiels J
- journal: Stand Genomic Sci
- DOI: 10.1186/s40793-016-0187-1
- year: 2016
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44094 | Curators of the CCUG | https://www.ccug.se/strain?id=14 | Culture Collection University of Gothenburg (CCUG) (CCUG 14) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 96881 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID8846.1 |