Strain identifier

BacDive ID: 140912

Type strain: Yes

Species: Acinetobacter equi

Strain Designation: 114

NCBI tax ID(s): 1324350 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 43765

BacDive-ID: 140912

DSM-Number: 27228

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, rod-shaped

description: Acinetobacter equi 114 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Faeces from a horse.

NCBI tax id

  • NCBI tax id: 1324350
  • Matching level: species

doi: 10.13145/bacdive140912.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter equi
  • full scientific name: Acinetobacter equi Poppel et al. 2016

@ref: 43765

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter equi

strain designation: 114

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotilityconfidence
43765negative1-1.5 µm0.8 µmrod-shapedno
69480no91.157
69480negative99.992

colony morphology

@refcolony sizecolony colorincubation periodmedium used
437651-2 mmRed1 dayCHROMagar Acinetobacter
632071 day

Culture and growth conditions

culture medium

@refnamegrowth
43765Bile-chrysoidine-glycerol agaryes
43765CHROMagar Acinetobacteryes
43765MacConkey agaryes

culture temp

@refgrowthtypetemperaturerange
43765positivegrowth37mesophilic
43765nogrowth41thermophilic
63207positivegrowth30-37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
43765aerobe
63207aerobe

spore formation

@refspore formationconfidence
69481no95
69480no99.995

observation

  • @ref: 43765
  • observation: Non-haemolytic on sheep blood agar

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
43765620642,3-butanediol-assimilation
4376516865gamma-aminobutyric acid-assimilation
4376578208azelaate-assimilation
4376516150benzoate-assimilation
4376516958beta-alanine-assimilation
4376515588D-malate-assimilation
4376516236ethanol-assimilation
4376517859glutaric acid-assimilation
4376516467L-arginine-assimilation
4376529991L-aspartate-assimilation
4376515603L-leucine-assimilation
4376515729L-ornithine-assimilation
4376517295L-phenylalanine-assimilation
4376530924L-tartrate-assimilation
4376515792malonate-assimilation
4376517148putrescine-assimilation
4376515708trans-aconitate-assimilation
4376562517tricarballylate-assimilation
4376518123trigonelline-assimilation
4376516765tryptamine-assimilation
43765178794-hydroxybenzoate+assimilation
4376517128adipate+assimilation
4376516947citrate+assimilation
4376524996lactate+assimilation
4376525115malate+assimilation
4376558044gentisate+assimilation
4376530849L-arabinose+assimilation
4376515971L-histidine+assimilation
4376518401phenylacetate+assimilation
4376564243sodium L-glutamate+assimilation
4376517632nitrate+reduction
4376527689decanoate+/-assimilation
4376517634D-glucose+/-builds acid from

enzymes

@refvalueactivityec
43765gelatinase-
43765arginine dihydrolase+/-3.5.3.6
43765catalase+1.11.1.6
43765cytochrome oxidase-1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitudeisolation datesampling date
43765Faeces from a horseMinsleben, Saxony-AnhaltGermanyDEUEurope51.86610.8282012-10
63207Faeces from horseHarz districtGermanyDEUEurope2012-11-03

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Equidae (Horse)
#Host Body Product#Gastrointestinal tract#Feces (Stool)

taxonmaps

  • @ref: 69479
  • File name: preview.99_2478.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_11;97_38;98_1930;99_2478&stattab=map
  • Last taxonomy: Acinetobacter equi
  • 16S sequence: KC494698
  • Sequence Identity:
  • Total samples: 65
  • soil counts: 1
  • aquatic counts: 18
  • animal counts: 43
  • plant counts: 3

Sequence information

16S sequences

  • @ref: 43765
  • description: 16S rRNA gene sequence
  • accession: KC494698
  • database: nuccore

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter equi 114GCA_001307195completencbi1324350
66792Acinetobacter sp. 1141324350.3completepatric1324350
66792Acinetobacter equi 1142648501117completeimg1324350

GC content

  • @ref: 43765
  • GC-content: 34.9

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno95no
motileno91.18yes
flagellatedno95.111yes
gram-positiveno98.11yes
anaerobicno98.856yes
aerobicyes89.856yes
halophileno82.112no
spore-formingno97.372no
glucose-utilno76.958no
thermophileno99.615no
glucose-fermentno87.838no

External links

@ref: 43765

culture collection no.: CCUG 65204, DSM 27228

straininfo link

  • @ref: 96810
  • straininfo: 410369

literature

  • topic: Phylogeny
  • Pubmed-ID: 26620413
  • title: Acinetobacter equi sp. nov., isolated from horse faeces.
  • authors: Poppel MT, Skiebe E, Laue M, Bergmann H, Ebersberger I, Garn T, Fruth A, Baumgardt S, Busse HJ, Wilharm G
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000806
  • year: 2015

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
43765Marie T. Poppel, Evelyn Skiebe, Michael Laue, Holger Bergmann, Ingo Ebersberger, Thomas Garn, Angelika Fruth, Sandra Baumgardt, Hans-Jürgen Busse, Gottfried WilharmAcinetobacter equi sp. nov., isolated from horse faeces10.1099/ijsem.0.000806IJSEM 66: 881-888 201626620413
63207Curators of the CCUGhttps://www.ccug.se/strain?id=65204Culture Collection University of Gothenburg (CCUG) (CCUG 65204)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
96810Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID410369.1