Strain identifier
BacDive ID: 140803
Type strain: 
Species: Piscinibacter sakaiensis
Strain Designation: 201-F6
Strain history: <- NBRC; NBRC 110686 <- K. Oda, Graduate School Sci. Technol., Kyoto; 201-F6
NCBI tax ID(s): 1547922 (species)
version 8.1 (current version)
General
@ref: 67666
BacDive-ID: 140803
DSM-Number: 112585
keywords: genome sequence, 16S sequence, Bacteria, aerobe, Gram-negative, motile, rod-shaped, colony-forming
description: Piscinibacter sakaiensis 201-F6 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from a microbial consortium that degrades poly .
NCBI tax id
- NCBI tax id: 1547922
- Matching level: species
strain history
- @ref: 67666
- history: <- NBRC; NBRC 110686 <- K. Oda, Graduate School Sci. Technol., Kyoto; 201-F6
doi: 10.13145/bacdive140803.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Burkholderiales, not assigned to family
- genus: Piscinibacter
- species: Piscinibacter sakaiensis
- full scientific name: Piscinibacter sakaiensis (Tanasupawat et al. 2016) Liu et al. 2023
synonyms
- @ref: 20215
- synonym: Ideonella sakaiensis
@ref: 67666
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Ideonella
species: Ideonella sakaiensis
full scientific name: Ideonella sakaiensis Tanasupawat et al. 2016
strain designation: 201-F6
type strain: yes
Morphology
cell morphology
- @ref: 43583
- gram stain: negative
- cell length: 1.2-1.5 µm
- cell width: 0.6-0.8 µm
- cell shape: rod-shaped
- motility: yes
- flagellum arrangement: monotrichous
colony morphology
- @ref: 43583
- colony size: 0.5-1 mm
- colony color: Translucent to cream
- colony shape: circular
- incubation period: 2 days
- medium used: NBRC no. 802 agar medium
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 67666 | R2A MEDIUM (DSMZ Medium 830) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium830.pdf | |
| 43583 | NBRC no. 802 agar medium | yes | ||
| 67666 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| 67666 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 67666 | TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) | yes | https://mediadive.dsmz.de/medium/545 | Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 43583 | positive | growth | 15-42 | |
| 43583 | positive | optimum | 30-37 | mesophilic |
| 67666 | positive | growth | 28 | mesophilic |
| 67666 | positive | growth | 35 | mesophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 43583 | positive | growth | 5.5-9 | alkaliphile |
| 43583 | positive | optimum | 7-7.5 |
Physiology and metabolism
oxygen tolerance
- @ref: 43583
- oxygen tolerance: aerobe
spore formation
- @ref: 43583
- spore formation: no
halophily
- @ref: 43583
- salt: NaCl
- growth: no
- tested relation: growth
- concentration: 3 %
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 43583 | 27689 | decanoate | - | assimilation |
| 43583 | 17634 | D-glucose | - | assimilation |
| 43583 | 16899 | D-mannitol | - | assimilation |
| 43583 | 16024 | D-mannose | - | assimilation |
| 43583 | 30849 | L-arabinose | - | assimilation |
| 43583 | 18401 | phenylacetate | - | assimilation |
| 43583 | 17234 | glucose | - | fermentation |
| 43583 | 29016 | arginine | - | hydrolysis |
| 43583 | 4853 | esculin | - | hydrolysis |
| 43583 | 5291 | gelatin | - | hydrolysis |
| 43583 | 16199 | urea | - | hydrolysis |
| 43583 | 17632 | nitrate | - | reduction |
| 43583 | 17128 | adipate | + | assimilation |
| 43583 | 17306 | maltose | + | assimilation |
| 43583 | 506227 | N-acetylglucosamine | + | assimilation |
| 43583 | 32032 | potassium gluconate | + | assimilation |
| 43583 | 53259 | poly(ethylene terephthalate) | + | degradation |
| 43583 | 16947 | citrate | +/- | assimilation |
| 43583 | 25115 | malate | +/- | assimilation |
| 43583 | 53258 | sodium citrate | +/- | assimilation |
| 68369 | 25115 | malate | - | assimilation |
| 68369 | 27689 | decanoate | - | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 43583 | 35581 | indole | no |
| 68369 | 35581 | indole | no |
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 43583 | catalase | + | 1.11.1.6 |
| 43583 | cytochrome oxidase | + | 1.9.3.1 |
| 43583 | alkaline phosphatase | + | 3.1.3.1 |
| 43583 | esterase Lipase (C 8) | + | |
| 43583 | leucine arylamidase | + | 3.4.11.1 |
| 43583 | alpha-glucosidase | + | 3.2.1.20 |
| 43583 | acid phosphatase | +/- | 3.1.3.2 |
| 43583 | naphthol-AS-BI-phosphohydrolase | +/- | |
| 43583 | lipase (C 14) | - | |
| 43583 | valine arylamidase | - | |
| 43583 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 43583 | beta-glucosidase | - | 3.2.1.21 |
| 43583 | alpha-chymotrypsin | - | 3.4.21.1 |
| 43583 | cystine arylamidase | - | 3.4.11.3 |
| 43583 | esterase (C 4) | - | |
| 43583 | alpha-fucosidase | - | 3.2.1.51 |
| 43583 | beta-glucuronidase | - | 3.2.1.31 |
| 43583 | alpha-mannosidase | - | 3.2.1.24 |
| 43583 | alpha-galactosidase | - | 3.2.1.22 |
| 43583 | beta-galactosidase | - | 3.2.1.23 |
| 43583 | trypsin | - | 3.4.21.4 |
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67666 | - | - | - | - | + | - | + | - | + | - | - | - | - | + | + | - | - | - | - | - | + |
| 67666 | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | +/- | - | - | - | + |
| 67666 | - | - | - | - | + | - | + | - | - | - | - | - | - | + | + | - | - | - | - | - | + |
| 67666 | - | - | - | - | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | latitude | longitude |
|---|---|---|---|---|---|---|---|
| 43583 | a microbial consortium that degrades poly (ethylene terephthalate) (PET) | Sakai City | Japan | JPN | Asia | ||
| 67666 | environmental sediment samples contaminated with PET debris | Sakai city | Japan | JPN | Asia | 34.57 | 135.413 |
isolation source categories
- Cat1: #Host
- Cat2: #Microbial
taxonmaps
- @ref: 69479
- File name: preview.99_4576.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_1718;97_2769;98_3438;99_4576&stattab=map
- Last taxonomy: Ideonella sakaiensis
- 16S sequence: LC002525
- Sequence Identity:
- Total samples: 214
- soil counts: 104
- aquatic counts: 72
- animal counts: 37
- plant counts: 1
Safety information
risk assessment
- @ref: 67666
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 43583
- description: 16S rRNA gene sequence
- accession: LC002525
- database: nuccore
Genome sequences
- @ref: 66792
- description: Ideonella sakaiensis 201-F6
- accession: GCA_001293525
- assembly level: contig
- database: ncbi
- NCBI tax ID: 1547922
GC content
- @ref: 43583
- GC-content: 70.4
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 85.532 | yes |
| flagellated | yes | 68.994 | yes |
| gram-positive | no | 98.876 | no |
| anaerobic | no | 96.979 | no |
| aerobic | yes | 87.014 | yes |
| halophile | no | 93.606 | no |
| spore-forming | no | 94.243 | no |
| glucose-util | no | 71.384 | yes |
| thermophile | no | 97.346 | yes |
| glucose-ferment | no | 91.114 | yes |
External links
@ref: 67666
culture collection no.: NBRC 110686, TISTR 2288, DSM 112585
straininfo link
- @ref: 96794
- straininfo: 402444
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 26965627 | A bacterium that degrades and assimilates poly(ethylene terephthalate). | Yoshida S, Hiraga K, Takehana T, Taniguchi I, Yamaji H, Maeda Y, Toyohara K, Miyamoto K, Kimura Y, Oda K | Science | 10.1126/science.aad6359 | 2016 | Amino Acid Sequence, Betaproteobacteria/*enzymology, Environmental Restoration and Remediation, Enzymes/classification/genetics/metabolism, Hydrolysis, Microbial Consortia, Molecular Sequence Data, Phthalic Acids/metabolism, Phylogeny, Plastics/*metabolism, Polyethylene Terephthalates/*metabolism, Recycling | Phylogeny |
| Phylogeny | 27045688 | Ideonella sakaiensis sp. nov., isolated from a microbial consortium that degrades poly(ethylene terephthalate). | Tanasupawat S, Takehana T, Yoshida S, Hiraga K, Oda K | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001058 | 2016 | Bacterial Typing Techniques, Base Composition, Betaproteobacteria/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Japan, *Microbial Consortia, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Polyethylene Terephthalates/*chemistry, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Ubiquinone/chemistry | Transcriptome |
| Metabolism | 27540159 | Comment on "A bacterium that degrades and assimilates poly(ethylene terephthalate)". | Yang Y, Yang J, Jiang L | Science | 10.1126/science.aaf8305 | 2016 | Betaproteobacteria/*enzymology, Plastics/*metabolism, Polyethylene Terephthalates/*metabolism | Enzymology |
| Biotechnology | 29666242 | Characterization and engineering of a plastic-degrading aromatic polyesterase. | Austin HP, Allen MD, Donohoe BS, Rorrer NA, Kearns FL, Silveira RL, Pollard BC, Dominick G, Duman R, El Omari K, Mykhaylyk V, Wagner A, Michener WE, Amore A, Skaf MS, Crowley MF, Thorne AW, Johnson CW, Woodcock HL, McGeehan JE, Beckham GT | Proc Natl Acad Sci U S A | 10.1073/pnas.1718804115 | 2018 | Bacterial Proteins/*chemistry/genetics, Burkholderiales/*enzymology/genetics, Crystallography, X-Ray, Esterases/*chemistry/genetics, Polyethylene Terephthalates/*chemistry, Protein Engineering, Substrate Specificity | Enzymology |
| Metabolism | 30477746 | Production of extracellular PETase from Ideonella sakaiensis using sec-dependent signal peptides in E. coli. | Seo H, Kim S, Son HF, Sagong HY, Joo S, Kim KJ | Biochem Biophys Res Commun | 10.1016/j.bbrc.2018.11.087 | 2018 | Burkholderiales/*enzymology, Escherichia coli/*metabolism, Escherichia coli Proteins/*metabolism, Hydrolases/*biosynthesis, Polyethylene Terephthalates/*metabolism, *Protein Sorting Signals | Biotechnology |
| Enzymology | 31632361 | In silico Screening and Heterologous Expression of a Polyethylene Terephthalate Hydrolase (PETase)-Like Enzyme (SM14est) With Polycaprolactone (PCL)-Degrading Activity, From the Marine Sponge-Derived Strain Streptomyces sp. SM14. | Almeida EL, Carrillo Rincon AF, Jackson SA, Dobson ADW | Front Microbiol | 10.3389/fmicb.2019.02187 | 2019 | ||
| Enzymology | 32160855 | Construction and Cloning of Plastic-degrading Recombinant Enzymes (MHETase). | Janatunaim RZ, Fibriani A | Recent Pat Biotechnol | 10.2174/1872208314666200311104541 | 2020 | Amino Acid Sequence, Bacterial Proteins/genetics/*metabolism, Biodegradation, Environmental, Burkholderiales/*chemistry/enzymology/genetics, Cloning, Molecular/methods, Environmental Pollutants/chemistry/*metabolism, Enzyme Assays, Escherichia coli/genetics/metabolism, Gene Expression, Humans, Hydrolases/genetics/*metabolism, Industrial Microbiology/methods, Kinetics, Patents as Topic, Plasmids/*chemistry/metabolism, Polyethylene Terephthalates/chemistry/*metabolism, Promoter Regions, Genetic, Protein Sorting Signals/genetics, Recombinant Proteins/genetics/metabolism | Metabolism |
| Metabolism | 32269349 | An engineered PET depolymerase to break down and recycle plastic bottles. | Tournier V, Topham CM, Gilles A, David B, Folgoas C, Moya-Leclair E, Kamionka E, Desrousseaux ML, Texier H, Gavalda S, Cot M, Guemard E, Dalibey M, Nomme J, Cioci G, Barbe S, Chateau M, Andre I, Duquesne S, Marty A | Nature | 10.1038/s41586-020-2149-4 | 2020 | Actinobacteria/enzymology, Burkholderiales/enzymology, Carboxylic Ester Hydrolases/chemistry/metabolism, Disulfides/chemistry/metabolism, Enzyme Assays, Enzyme Stability, Fusarium/enzymology, Hydrolases/*chemistry/*metabolism, Models, Molecular, Phthalic Acids/metabolism, Plastics/*chemistry/*metabolism, Polyethylene Terephthalates/*chemistry/*metabolism, Polymerization, *Protein Engineering, *Recycling, Thermobifida | Enzymology |
| Enzymology | 32345276 | Functional expression of polyethylene terephthalate-degrading enzyme (PETase) in green microalgae. | Kim JW, Park SB, Tran QG, Cho DH, Choi DY, Lee YJ, Kim HS | Microb Cell Fact | 10.1186/s12934-020-01355-8 | 2020 | Biocatalysis, Hydrolases/*genetics/metabolism, Hydrolysis, Microalgae/*enzymology, Microscopy, Electron, Scanning, Particle Size, Polyethylene Terephthalates/chemistry/*metabolism, Surface Properties | Metabolism |
| Enzymology | 33470503 | Novel Pet-Degrading Enzymes: Structure-Function from a Computational Perspective. | Berselli A, Ramos MJ, Menziani MC | Chembiochem | 10.1002/cbic.202000841 | 2021 | Burkholderiales/enzymology, Hydrolases/chemistry/*metabolism, Hydrolysis, Molecular Conformation, Polyethylene Terephthalates/chemistry/*metabolism | Metabolism |
| Metabolism | 33561457 | Class I hydrophobins pretreatment stimulates PETase for monomers recycling of waste PETs. | Puspitasari N, Tsai SL, Lee CK | Int J Biol Macromol | 10.1016/j.ijbiomac.2021.02.026 | 2021 | Aspergillus oryzae/metabolism, Bacterial Proteins/*metabolism, Biocatalysis, Biodegradation, Environmental, Burkholderiales/enzymology, Fungal Proteins/metabolism, Grifola/metabolism, Hydrolases/*metabolism, Hydrolysis, Hydrophobic and Hydrophilic Interactions, Industrial Waste, Polyethylene Terephthalates/chemistry/*metabolism, Recombinant Proteins/metabolism, Recycling/*methods | Enzymology |
| Metabolism | 33576230 | Enhanced Extracellular Production of IsPETase in Escherichia coli via Engineering of the pelB Signal Peptide. | Shi L, Liu H, Gao S, Weng Y, Zhu L | J Agric Food Chem | 10.1021/acs.jafc.0c07469 | 2021 | *Burkholderiales/metabolism, Escherichia coli/genetics/metabolism, Hydrolases/metabolism, *Protein Sorting Signals | Biotechnology |
| Enzymology | 33579403 | Ideonella sakaiensis, PETase, and MHETase: From identification of microbial PET degradation to enzyme characterization. | Yoshida S, Hiraga K, Taniguchi I, Oda K | Methods Enzymol | 10.1016/bs.mie.2020.12.007 | 2021 | *Burkholderiales, Hydrolases, Hydrolysis, Polyethylene Terephthalates | Metabolism |
| Metabolism | 33753197 | Protein engineering of stable IsPETase for PET plastic degradation by Premuse. | Meng X, Yang L, Liu H, Li Q, Xu G, Zhang Y, Guan F, Zhang Y, Zhang W, Wu N, Tian J | Int J Biol Macromol | 10.1016/j.ijbiomac.2021.03.058 | 2021 | Bacterial Proteins/chemistry/genetics/*metabolism, Burkholderiales/*enzymology/genetics, Computational Biology/*methods, Enzyme Assays/methods, Hydrolases/classification/genetics/*metabolism, Hydrolysis, Internet, Kinetics, Molecular Docking Simulation, Molecular Dynamics Simulation, Mutation, Phylogeny, Polyethylene Terephthalates/chemistry/*metabolism, Protein Engineering/*methods, Protein Stability, Transition Temperature | Enzymology |
| Metabolism | 33797026 | Emerging Roles of PETase and MHETase in the Biodegradation of Plastic Wastes. | Maity W, Maity S, Bera S, Roy A | Appl Biochem Biotechnol | 10.1007/s12010-021-03562-4 | 2021 | Bacterial Proteins/*chemistry/genetics/metabolism, Biodegradation, Environmental, Burkholderiales/*enzymology/genetics, Hydrolases/*chemistry/genetics/metabolism, Plastics/*chemistry, Polyethylene Terephthalates/*chemistry | Enzymology |
| Metabolism | 34075621 | Assessment of the PETase conformational changes induced by poly(ethylene terephthalate) binding. | da Costa CHS, Dos Santos AM, Alves CN, Marti S, Moliner V, Santana K, Lameira J | Proteins | 10.1002/prot.26155 | 2021 | Bacterial Proteins/*metabolism, Biocatalysis, Burkholderiales/*metabolism, Hydrolases/*metabolism, Hydrolysis, Polyethylene Terephthalates/*metabolism | |
| Metabolism | 34085821 | QM/MM Study of the Enzymatic Biodegradation Mechanism of Polyethylene Terephthalate. | Boneta S, Arafet K, Moliner V | J Chem Inf Model | 10.1021/acs.jcim.1c00394 | 2021 | Bacterial Proteins, Biodegradation, Environmental, *Burkholderiales, Hydrolases, *Polyethylene Terephthalates | |
| Metabolism | 34260304 | Development of a Targeted Gene Disruption System in the Poly(Ethylene Terephthalate)-Degrading Bacterium Ideonella sakaiensis and Its Applications to PETase and MHETase Genes. | Hachisuka SI, Nishii T, Yoshida S | Appl Environ Microbiol | 10.1128/AEM.00020-21 | 2021 | Bacterial Proteins/*genetics/metabolism, Burkholderiales/*genetics/*metabolism, Ethylene Glycol/metabolism, Genes, Bacterial, Hydrolases/*genetics/metabolism, Hydrolysis, Metabolic Engineering, Phthalic Acids/metabolism, Polyethylene Terephthalates/*metabolism, Recycling | |
| 34620982 | Direct fermentative conversion of poly(ethylene terephthalate) into poly(hydroxyalkanoate) by Ideonella sakaiensis. | Fujiwara R, Sanuki R, Ajiro H, Fukui T, Yoshida S | Sci Rep | 10.1038/s41598-021-99528-x | 2021 | |||
| Enzymology | 35008691 | An Efficient Protein Evolution Workflow for the Improvement of Bacterial PET Hydrolyzing Enzymes. | Pirillo V, Orlando M, Tessaro D, Pollegioni L, Molla G | Int J Mol Sci | 10.3390/ijms23010264 | 2021 | Bacteria/*enzymology, Biodegradation, Environmental, Computer Simulation, Enzyme Stability, Enzymes/*metabolism, Hydrolysis, Kinetics, Microplastics, Molecular Dynamics Simulation, Nanoparticles/chemistry, Polyethylene Terephthalates/*chemistry, *Protein Engineering, Temperature | Metabolism |
| Metabolism | 36246227 | Hydrophobic cell surface display system of PETase as a sustainable biocatalyst for PET degradation. | Jia Y, Samak NA, Hao X, Chen Z, Wen Q, Xing J | Front Microbiol | 10.3389/fmicb.2022.1005480 | 2022 |
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 43583 | Somboon Tanasupawat, Toshihiko Takehana, Shosuke Yoshida, Kazumi Hiraga, Kohei Oda | Ideonella sakaiensis sp. nov., isolated from a microbial consortium that degrades poly(ethylene terephthalate) | 10.1099/ijsem.0.001058 | IJSEM 66: 2813-2818 2016 | 27045688 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 67666 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-112585 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 112585) | |||
| 68369 | Automatically annotated from API 20NE | |||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 96794 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402444.1 |