Strain identifier
BacDive ID: 140452
Type strain: 
Species: Halanaerocella petrolearia
Strain Designation: S200
Strain history: D. Alazard S200.
NCBI tax ID(s): 644790 (species)
version 8.1 (current version)
General
@ref: 43059
BacDive-ID: 140452
DSM-Number: 22693
keywords: 16S sequence, Bacteria, thermophilic
description: Halanaerocella petrolearia S200 is a thermophilic bacterium that was isolated from deep subsurface oil-bearing sandstone core from an onshore hypersaline oil reservoir.
NCBI tax id
- NCBI tax id: 644790
- Matching level: species
strain history
| @ref | history |
|---|---|
| 43059 | <- D. Alazard, Lab. Microbiol. de l'IRD, Univ. de Provence et de la Méditerranée, Marseille, France; S200 <- G. Gales |
| 67770 | D. Alazard S200. |
doi: 10.13145/bacdive140452.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Halanaerobiales
- family: Halobacteroidaceae
- genus: Halanaerocella
- species: Halanaerocella petrolearia
- full scientific name: Halanaerocella petrolearia Gales et al. 2011
@ref: 43059
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Halanaerobiales
family: Halobacteroidaceae
genus: Halanaerocella
species: Halanaerocella petrolearia
full scientific name: Halanaerocella petrolearia Gales et al. 2011
strain designation: S200
type strain: yes
Culture and growth conditions
culture medium
- @ref: 43059
- name: HALANAEROBACTER JERIDENSE MEDIUM (DSMZ Medium 1375)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1375
- composition: Name: HALANAEROBACTER JERIDENSE MEDIUM (DSMZ Medium 1375) Composition: Na2CO3 25.3 g/l Glucose 15.44 g/l MgCl2 x 6 H2O 10.0 g/l KCl 2.0 g/l NH4Cl 1.0 g/l K2HPO4 x 3 H2O 0.5 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l ZnSO4 x 7 H2O 0.0018 g/l CoSO4 x 7 H2O 0.0018 g/l CaCl2 x 2 H2O 0.001 g/l Resazurin 0.001 g/l FeSO4 x 7 H2O 0.001 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l CuSO4 x 5 H2O 0.0001 g/l H3BO3 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l Na2SeO3 x 5 H2O 3e-06 g/l Na2S x 9 H2O Yeast extract L-Cysteine Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 43059 | positive | growth | 40 | thermophilic |
| 67770 | positive | growth | 40 | thermophilic |
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 43059 | deep subsurface oil-bearing sandstone core from an onshore hypersaline oil reservoir | Gabon | GAB | Africa |
| 67770 | Deep subsurface oil-bearing sandstone core from an onshore oil reservoir in Gabon at a depth of 1,153 m |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Condition | #Saline | |
| #Engineered | #Industrial | #Oil reservoir |
| #Environmental | #Terrestrial | #Core sample |
taxonmaps
- @ref: 69479
- File name: preview.99_18105.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17078;96_9252;97_11127;98_13678;99_18105&stattab=map
- Last taxonomy: Halanaerocella petrolearia subclade
- 16S sequence: FJ931099
- Sequence Identity:
- Total samples: 327
- soil counts: 21
- aquatic counts: 142
- animal counts: 138
- plant counts: 26
Sequence information
16S sequences
- @ref: 43059
- description: Halanaerocella petrolearia strain S200 16S ribosomal RNA gene, partial sequence
- accession: FJ931099
- length: 1487
- database: ena
- NCBI tax ID: 644790
GC content
- @ref: 43059
- GC-content: 32.7
- method: high performance liquid chromatography (HPLC)
External links
@ref: 43059
culture collection no.: DSM 22693, JCM 16358
literature
- topic: Phylogeny
- Pubmed-ID: 21761211
- title: Characterization of Halanaerocella petrolearia gen. nov., sp. nov., a new anaerobic moderately halophilic fermentative bacterium isolated from a deep subsurface hypersaline oil reservoir : New taxa: Firmicutes (Class Clostridia, Order Halanaerobiales, Halobacteroidaceae, Halobacteroides).
- authors: Gales G, Chehider N, Joulian C, Battaglia-Brunet F, Cayol JL, Postec A, Borgomano J, Neria-Gonzalez I, Lomans BP, Ollivier B, Alazard D
- journal: Extremophiles
- DOI: 10.1007/s00792-011-0387-y
- year: 2011
- mesh: Anaerobiosis/physiology, Base Sequence, Carbohydrate Metabolism/*physiology, Genotype, Gram-Positive Endospore-Forming Bacteria/cytology/*genetics/isolation & purification/*metabolism, Hydrogen-Ion Concentration, Molecular Sequence Data, *Phylogeny, Salinity
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 43059 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22693 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22693) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |