General

@ref: 42981

BacDive-ID: 140374

DSM-Number: 103339

keywords: 16S sequence, Bacteria

description: Promicromonospora callitridis DSM 103339 is a bacterium that was isolated from surface-sterilized root of an Australian native pine .

NCBI tax id

• NCBI tax id: 722702
• Matching level: species

strain history

• @ref: 42981
• history: <- O. Kaewkla, Flinders Univ., Bedford Park, South Australia; CAP94

doi: 10.13145/bacdive140374.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Micrococcales
• family: Promicromonosporaceae
• genus: Promicromonospora
• species: Promicromonospora callitridis
• full scientific name: Promicromonospora callitridis Kaewkla and Franco 2017

@ref: 42981

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Promicromonosporaceae

genus: Promicromonospora

species: Promicromonospora callitridis

full scientific name: Promicromonospora callitridis Kaewkla and Franco 2017

type strain: yes

Culture and growth conditions

culture medium

• @ref: 42981
• name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
• growth: yes
• link: https://mediadive.dsmz.de/medium/65
• composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

• @ref: 42981
• growth: positive
• type: growth
• temperature: 28

Isolation, sampling and environmental information

isolation

• @ref: 42981
• sample type: surface-sterilized root of an Australian native pine (Callitris preissii)
• host species: Callitris preissii
• geographic location: Adelaide, Flinders University campus at Bedford park, carpark 5
• country: Australia
• origin.country: AUS
• continent: Australia and Oceania

isolation source categories

Safety information

risk assessment

• @ref: 42981
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 42981
• description: Promicromonospora callitridis 16S ribosomal RNA gene, partial sequence
• accession: GU434237
• length: 1434
• database: nuccore
• NCBI tax ID: 722702

GC content

• @ref: 42981
• GC-content: 67
• method: high performance liquid chromatography (HPLC)

External links

@ref: 42981

culture collection no.: DSM 103339, TBRC 6025, CAP 94

straininfo link

• @ref: 96672
• straininfo: 397010

literature

• topic: Phylogeny
• Pubmed-ID: 28866992
• title: Promicromonospora callitridis sp. nov., an endophytic actinobacterium isolated from the surface-sterilized root of an Australian native pine tree.
• authors: Kaewkla O, Franco CMM
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.002165
• year: 2017
• mesh: Actinomycetales/*classification/genetics/isolation & purification, Australia, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, *Phylogeny, Pinus/*microbiology, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/chemistry
• topic2: Transcriptome

Reference