Strain identifier
BacDive ID: 140345
Type strain: 
Species: Mycobacterium talmoniae
Strain Designation: NE-TNMC-100812
Strain history: <- P. Iwen, University of Nebraska Medical Center, USA; NE-TNMC-100812
NCBI tax ID(s): 1858794 (species)
version 8.1 (current version)
General
@ref: 42952
BacDive-ID: 140345
DSM-Number: 46873
keywords: 16S sequence, Bacteria, Gram-positive, rod-shaped, human pathogen
description: Mycobacterium talmoniae NE-TNMC-100812 is a Gram-positive, rod-shaped human pathogen that was isolated from bronchoalveolar lavage.
NCBI tax id
- NCBI tax id: 1858794
- Matching level: species
strain history
- @ref: 42952
- history: <- P. Iwen, University of Nebraska Medical Center, USA; NE-TNMC-100812
doi: 10.13145/bacdive140345.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Mycobacteriaceae
- genus: Mycobacterium
- species: Mycobacterium talmoniae
- full scientific name: Mycobacterium talmoniae Davidson et al. 2017
@ref: 42952
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Mycobacteriaceae
genus: Mycobacterium
species: Mycobacterium talmoniae
full scientific name: Mycobacterium talmoniae Davidson et al. 2017
strain designation: NE-TNMC-100812
type strain: yes
Morphology
cell morphology
- @ref: 43430
- gram stain: positive
- cell shape: rod-shaped
colony morphology
- @ref: 43430
- colony color: non-pigmentet, rough
- medium used: Middlebrook 7H11 agar
multimedia
- @ref: 42952
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46873.jpg
- caption: Medium 645 37°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 43430 | Middlebrook 7H11 agar | yes | ||
| 42952 | MIDDLEBROOK MEDIUM (DSMZ Medium 645) | yes | https://mediadive.dsmz.de/medium/645 | Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 43430 | positive | growth | 25-42 | |
| 43430 | positive | optimum | 37 | mesophilic |
| 42952 | positive | growth | 37 | mesophilic |
Physiology and metabolism
antibiotic resistance
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. | is resistant | resistance conc. |
|---|---|---|---|---|---|---|---|
| 43430 | 3732 | clarithromycin | yes | yes | 0.25 µg/mL | ||
| 43430 | 63611 | moxifloxacin | yes | yes | 2 µg/mL | ||
| 43430 | 2637 | amikacin | yes | yes | 2 µg/mL | ||
| 43430 | 4877 | ethambutol | yes | yes | 5 µg/mL | ||
| 43430 | 28077 | rifampicin | yes | yes | 2 µg/mL | ||
| 43430 | 45367 | rifabutin | yes | yes | 0.25 µg/mL | ||
| 43430 | 63607 | linezolid | yes | yes | 64 µg/mL | ||
| 43430 | 100241 | ciprofloxacin | yes | yes | 4 µg/mL | ||
| 43430 | 17076 | streptomycin | yes | yes | 4 µg/mL | ||
| 43430 | 3749 | clofazimine | yes | yes | 0.5 µg/mL |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 42952 | bronchoalveolar lavage | Nebraska | USA | USA | North America |
| 43430 | human sputum | Nebraska | USA | USA | North America |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Fluids | #Sputum |
Safety information
risk assessment
- @ref: 42952
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 42952
- description: Mycobacterium talmoniae strain NE-TNMC-100812 16S ribosomal RNA gene, partial sequence
- accession: KX008970
- length: 1540
- database: ena
- NCBI tax ID: 1858794
External links
@ref: 42952
culture collection no.: DSM 46873, ATCC BAA 2683
straininfo link
- @ref: 96644
- straininfo: 403465
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 28809146 | Mycobacterium talmoniae sp. nov., a slowly growing mycobacterium isolated from human respiratory samples. | Davidson RM, DeGroote MA, Marola JL, Buss S, Jones V, McNeil MR, Freifeld AG, Elaine Epperson L, Hasan NA, Jackson M, Iwen PC, Salfinger M, Strong M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001998 | 2017 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Genes, Bacterial, Humans, Mycobacterium/*classification/genetics/isolation & purification, Mycobacterium Infections/microbiology, Mycolic Acids/chemistry, Oregon, *Phylogeny, RNA, Ribosomal, 16S/genetics, Respiratory System/*microbiology, Sequence Analysis, DNA | Pathogenicity |
| Phylogeny | 30429252 | Mycobacterium talmoniae, a Potential Pulmonary Pathogen Isolated from Multiple Patients with Bronchiectasis in the United States, Including the First Case of Clinical Disease in a Patient with Cystic Fibrosis. | Vasireddy R, Vasireddy S, Brown-Elliott BA, Greninger AL, Davidson RM, Ard KL, Turenne CY, Wallace RJ Jr | J Clin Microbiol | 10.1128/JCM.00906-18 | 2019 | Aged, Anti-Bacterial Agents/pharmacology, Bacterial Proteins/genetics, Bronchiectasis/*complications, Chaperonin 60/genetics, Child, Cluster Analysis, Cystic Fibrosis/*complications, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, DNA-Directed RNA Polymerases/genetics, Female, Humans, Louisiana, Lung Diseases, Fungal/*diagnosis/microbiology, Male, Massachusetts, Microbial Sensitivity Tests, Mycobacterium/*classification/drug effects/genetics/*isolation & purification, Mycobacterium Infections/*diagnosis/microbiology, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Texas | Pathogenicity |
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 42952 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46873 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46873) | |||
| 43430 | Rebecca M. Davidson, Mary Ann DeGroote, Jamie L. Marola, Sarah Buss, Victoria Jones, Michael R. McNeil, Alison G. Freifeld, L. Elaine Epperson, Nabeeh A. Hasan, Mary Jackson, Peter C. Iwen, Max Salfinger, Michael Strong | Mycobacterium talmoniae sp. nov., a slowly growing mycobacterium isolated from human respiratory samples | 10.1099/ijsem.0.001998 | IJSEM 67: 2640-2645 2017 | 28809146 | |
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 96644 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403465.1 |