Strain identifier

BacDive ID: 140033

Type strain: No

Species: Desulfonatronovibrio thiodismutans

Strain history: <- D. Y. Sorokin, Dept. Biotechnol., Delft Univ. Technol., Netherlands; AHT10 <- D. Y. Sorokin {2007}

NCBI tax ID(s): 617000 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 42640

BacDive-ID: 140033

DSM-Number: 21357

keywords: 16S sequence, Bacteria

description: Desulfonatronovibrio thiodismutans DSM 21357 is a bacterium that was isolated from sediments from hypersaline soda lake.

NCBI tax id

  • NCBI tax id: 617000
  • Matching level: species

strain history

  • @ref: 42640
  • history: <- D. Y. Sorokin, Dept. Biotechnol., Delft Univ. Technol., Netherlands; AHT10 <- D. Y. Sorokin {2007}

doi: 10.13145/bacdive140033.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfovibrionales
  • family: Desulfohalobiaceae
  • genus: Desulfonatronovibrio
  • species: Desulfonatronovibrio thiodismutans
  • full scientific name: Desulfonatronovibrio thiodismutans Sorokin et al. 2011

@ref: 42640

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfovibrionales

family: Desulfohalobiaceae

genus: Desulfonatronovibrio

species: Desulfonatronovibrio thiodismutans

full scientific name: Desulfonatronovibrio thiodismutans Sorokin et al. 2011

type strain: no

Culture and growth conditions

culture medium

  • @ref: 42640
  • name: DESULFONATRONUM THIOAUTOTROPHICUM MEDIUM (DSMZ Medium 1166)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1166
  • composition: Name: DESULFONATRONUM THIOAUTOTROPHICUM MEDIUM (DSMZ Medium 1166) Composition: Na2CO3 21.9342 g/l NaHCO3 7.97607 g/l NaCl 5.98205 g/l Na2S2O3 x 5 H2O 4.98504 g/l Na-formate 3.38983 g/l Na2SO4 2.79163 g/l K2HPO4 0.997009 g/l Na-pyruvate 0.548355 g/l Na2S x 9 H2O 0.239282 g/l MgCl2 x 6 H2O 0.199402 g/l NH4Cl 0.199402 g/l Yeast extract 0.0498504 g/l EDTA 0.00498504 g/l FeSO4 x 7 H2O 0.00219342 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000199402 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnSO4 x 7 H2O 9.97009e-05 g/l Thiamine HCl 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l NiCl2 x 6 H2O 2.99103e-05 g/l MnCl2 x 4 H2O 2.99103e-05 g/l H3BO3 2.99103e-05 g/l CuCl2 x 2 H2O 2.99103e-05 g/l Na2MoO4 x 2 H2O 2.99103e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

  • @ref: 42640
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 42640
  • sample type: sediments from hypersaline soda lake
  • geographic location: Altai
  • country: Russia
  • origin.country: RUS
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Environmental#Aquatic#Sediment
#Condition#Alkaline
#Condition#Saline
#Environmental#Aquatic#Non-marine Saline and Alkaline

taxonmaps

  • @ref: 69479
  • File name: preview.99_88367.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_389;96_1711;97_4072;98_61040;99_88367&stattab=map
  • Last taxonomy: Desulfonatronovibrio
  • 16S sequence: FJ469580
  • Sequence Identity:
  • Total samples: 6
  • aquatic counts: 6

Safety information

risk assessment

  • @ref: 42640
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 42640
  • description: Desulfonatronovibrio thiodismutans strain AHT10 16S ribosomal RNA gene, partial sequence
  • accession: FJ469580
  • length: 1511
  • database: nuccore
  • NCBI tax ID: 617000

External links

@ref: 42640

culture collection no.: DSM 21357, AHT 10

straininfo link

  • @ref: 96455
  • straininfo: 402128

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42640Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-21357Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21357)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
96455Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID402128.1