Strain identifier

BacDive ID: 139905

Type strain: No

Species: Aeromicrobium sp.

Strain Designation: L 16

Strain history: <- S.-T. Lee, KAIST; L 16

NCBI tax ID(s): 1871063 (species)

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General

@ref: 42513

BacDive-ID: 139905

DSM-Number: 23464

keywords: 16S sequence, Bacteria

description: Aeromicrobium sp. L 16 is a bacterium that was isolated from soil of ginseng field.

NCBI tax id

  • NCBI tax id: 1871063
  • Matching level: species

strain history

  • @ref: 42513
  • history: <- S.-T. Lee, KAIST; L 16

doi: 10.13145/bacdive139905.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Propionibacteriales
  • family: Nocardioidaceae
  • genus: Aeromicrobium
  • species: Aeromicrobium sp.
  • full scientific name: Aeromicrobium Miller et al. 1991

@ref: 42513

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Nocardioidaceae

genus: Aeromicrobium

species: Aeromicrobium sp.

full scientific name: Aeromicrobium sp.

strain designation: L 16

type strain: no

Culture and growth conditions

culture medium

  • @ref: 42513
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 42513
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 42513
  • sample type: soil of ginseng field
  • geographic location: JiLin Province, Changbai Mountain
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Field
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)

taxonmaps

  • @ref: 69479
  • File name: preview.99_4273.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_142;96_1793;97_2595;98_3218;99_4273&stattab=map
  • Last taxonomy: Aeromicrobium
  • 16S sequence: GU294762
  • Sequence Identity:
  • Total samples: 4020
  • soil counts: 1179
  • aquatic counts: 1247
  • animal counts: 1447
  • plant counts: 147

Sequence information

16S sequences

  • @ref: 42513
  • description: Aeromicrobium sp. L16 16S ribosomal RNA gene, partial sequence
  • accession: GU294762
  • length: 1418
  • database: nuccore
  • NCBI tax ID: 707004

External links

@ref: 42513

culture collection no.: DSM 23464

straininfo link

  • @ref: 96338
  • straininfo: 399595

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
42513Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-23464Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23464)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
96338Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399595.1