Strain identifier
BacDive ID: 139855
Type strain: 
Species: Pseudonocardia sp.
Strain history: <- S.-K. Tang, YIM; YIM 65235 <- J. Li, YIM; YIM 65235
NCBI tax ID(s): 1072643 (species)
version 9 (current version)
General
@ref: 42463
BacDive-ID: 139855
DSM-Number: 45636
keywords: 16S sequence, Bacteria
description: Pseudonocardia sp. DSM 45636 is a bacterium that was isolated from plant.
NCBI tax id
- NCBI tax id: 1072643
- Matching level: species
strain history
- @ref: 42463
- history: <- S.-K. Tang, YIM; YIM 65235 <- J. Li, YIM; YIM 65235
doi: 10.13145/bacdive139855.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Pseudonocardiales
- family: Pseudonocardiaceae
- genus: Pseudonocardia
- species: Pseudonocardia sp.
- full scientific name: Pseudonocardia Henssen 1957 (Approved Lists 1980)
synonyms
@ref synonym 20215 Actinobispora 20215 Amycolata 20215 Pseudoamycolata
@ref: 42463
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Pseudonocardiaceae
genus: Pseudonocardia
species: Pseudonocardia sp.
full scientific name: Pseudonocardia sp.
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 42463 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| 42463 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 42463 | GPHF-MEDIUM (DSMZ Medium 553) | yes | https://mediadive.dsmz.de/medium/553 | Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water |
culture temp
- @ref: 42463
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 42463
- sample type: plant
- geographic location: Yunnan
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
- Cat1: #Host
- Cat2: #Plants
Sequence information
16S sequences
- @ref: 124043
- description: Pseudonocardia sp. YIM 65235 16S ribosomal RNA gene, partial sequence.
- accession: JN255252
- length: 1400
- database: nuccore
- NCBI tax ID: 1072643
External links
@ref: 42463
culture collection no.: DSM 45636, YIM 65235
straininfo link
- @ref: 96296
- straininfo: 397752
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42463 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45636 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45636) | |
| 96296 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397752.1 | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |