Strain identifier
BacDive ID: 139823
Type strain:
Species: Thermosipho sp.
Strain Designation: G60
Strain history: <- S. Raja, IUEM, Plouzané, France; G60 <- S. Raja {2007}
NCBI tax ID(s): 1968895 (species)
version 8.1 (current version)
General
@ref: 42431
BacDive-ID: 139823
DSM-Number: 21708
keywords: 16S sequence, Bacteria, thermophilic
description: Thermosipho sp. G60 is a thermophilic bacterium that was isolated from geothermal hot spring.
NCBI tax id
- NCBI tax id: 1968895
- Matching level: species
strain history
- @ref: 42431
- history: <- S. Raja, IUEM, Plouzané, France; G60 <- S. Raja {2007}
doi: 10.13145/bacdive139823.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/thermotogota
- domain: Bacteria
- phylum: Thermotogota
- class: Thermotogae
- order: Thermotogales
- family: Fervidobacteriaceae
- genus: Thermosipho
- species: Thermosipho sp.
- full scientific name: Thermosipho Huber et al. 1989
@ref: 42431
domain: Bacteria
phylum: Thermotogae
class: Thermotogae
order: Thermotogales
family: Fervidobacteriaceae
genus: Thermosipho
species: Thermosipho sp.
full scientific name: Thermosipho sp.
strain designation: G60
type strain: no
Culture and growth conditions
culture medium
- @ref: 42431
- name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c)
- growth: yes
- link: https://mediadive.dsmz.de/medium/141c
- composition: Name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c; with strain-specific modifications) Composition: NaHCO3 4.89237 g/l MgCl2 x 6 H2O 3.91389 g/l Yeast extract 1.95695 g/l Trypticase peptone 1.95695 g/l Na-acetate 0.978474 g/l Na2S x 9 H2O 0.489237 g/l L-Cysteine HCl x H2O 0.489237 g/l KCl 0.332681 g/l NH4Cl 0.244618 g/l K2HPO4 0.136986 g/l MgSO4 x 7 H2O 0.0293542 g/l Nitrilotriacetic acid 0.0146771 g/l NaCl 0.00978474 g/l MnSO4 x H2O 0.00489237 g/l Fe(NH4)2(SO4)2 x 6 H2O 0.00195695 g/l CoSO4 x 7 H2O 0.00176125 g/l ZnSO4 x 7 H2O 0.00176125 g/l CaCl2 x 2 H2O 0.000978474 g/l FeSO4 x 7 H2O 0.000978474 g/l Sodium resazurin 0.000489237 g/l NiCl2 x 6 H2O 0.000293542 g/l AlK(SO4)2 x 12 H2O 0.000195695 g/l CuSO4 x 5 H2O 9.78474e-05 g/l Pyridoxine hydrochloride 9.78474e-05 g/l Na2MoO4 x 2 H2O 9.78474e-05 g/l H3BO3 9.78474e-05 g/l (DL)-alpha-Lipoic acid 4.89237e-05 g/l Thiamine HCl 4.89237e-05 g/l Riboflavin 4.89237e-05 g/l Nicotinic acid 4.89237e-05 g/l Calcium D-(+)-pantothenate 4.89237e-05 g/l p-Aminobenzoic acid 4.89237e-05 g/l Biotin 1.95695e-05 g/l Folic acid 1.95695e-05 g/l Na2WO4 x 2 H2O 3.91389e-06 g/l Na2SeO3 x 5 H2O 2.93542e-06 g/l Vitamin B12 9.78474e-07 g/l Distilled water
culture temp
- @ref: 42431
- growth: positive
- type: growth
- temperature: 65
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 42431
- sample type: geothermal hot spring
- country: Tunisia
- origin.country: TUN
- continent: Africa
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Condition | #Thermophilic (>45°C) | |
#Environmental | #Aquatic | #Spring |
taxonmaps
- @ref: 69479
- File name: preview.99_547.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_93;96_347;97_387;98_444;99_547&stattab=map
- Last taxonomy: Thermosipho
- 16S sequence: FN556063
- Sequence Identity:
- Total samples: 46
- aquatic counts: 33
- animal counts: 12
- plant counts: 1
Sequence information
16S sequences
- @ref: 42431
- description: Thermosipho sp. G60 partial 16S rRNA gene, strain G60
- accession: FN556063
- length: 1436
- database: ena
- NCBI tax ID: 683137
External links
@ref: 42431
culture collection no.: DSM 21708
straininfo link
- @ref: 96266
- straininfo: 396978
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
42431 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21708 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21708) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
96266 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID396978.1 |