Strain identifier
BacDive ID: 139820
Type strain: 
Species: Sphingobacterium nematocida
Strain Designation: E88
Strain history: CIP <- 2012, P. Kämpfer, Giessen Univ., Giessen, Germany: strain E88 <- 2009, L. Kaiser
NCBI tax ID(s): 341027 (species)
General
@ref: 42428
BacDive-ID: 139820
DSM-Number: 25822
keywords: Bacteria, mesophilic
description: Sphingobacterium nematocida E88 is a mesophilic bacterium that was isolated from surface of juvenile leech .
NCBI tax id
- NCBI tax id: 341027
- Matching level: species
strain history
| @ref | history |
|---|---|
| 42428 | <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany; E88 <- L. Kaiser |
| 121258 | CIP <- 2012, P. Kämpfer, Giessen Univ., Giessen, Germany: strain E88 <- 2009, L. Kaiser |
doi: 10.13145/bacdive139820.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Sphingobacteriia
- order: Sphingobacteriales
- family: Sphingobacteriaceae
- genus: Sphingobacterium
- species: Sphingobacterium nematocida
- full scientific name: Sphingobacterium nematocida Liu et al. 2012
@ref: 42428
domain: Bacteria
phylum: Bacteroidetes
class: Sphingobacteriia
order: Flavobacteriales
family: Sphingobacteriaceae
genus: Sphingobacterium
species: Sphingobacterium nematocida
full scientific name: Sphingobacterium sp.
strain designation: E88
type strain: no
Morphology
cell morphology
- @ref: 121258
- motility: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 42428 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
| 121258 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
- @ref: 42428
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
| @ref | sample type | host species | geographic location | country | origin.country | continent | isolation date |
|---|---|---|---|---|---|---|---|
| 42428 | surface of juvenile leech ( Hirudo verbana ) | Hirudo verbana | Hessen, Biebertal | Germany | DEU | Europe | |
| 121258 | Animal, Surface of a juvenile leech | Biebertal, Hessen | Germany | DEU | Europe | 2009 |
isolation source categories
- Cat1: #Host
- Cat2: #Invertebrates (Other)
- Cat3: #Annelida
Safety information
risk assessment
- @ref: 121258
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
External links
@ref: 42428
culture collection no.: DSM 25822, CIP 110417, CCM 8409
straininfo link
- @ref: 96263
- straininfo: 403689
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42428 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25822 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25822) | |
| 96263 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403689.1 | |
| 121258 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110417 | Collection of Institut Pasteur (CIP 110417) |