Strain identifier
BacDive ID: 139799
Type strain: 
Species: Nocardioides sp.
Strain Designation: BX5-6
Strain history: <- S.-T. Lee, KAIST <- W.-T. Im; BX5-6
NCBI tax ID(s): 35761 (species)
version 8.1 (current version)
General
@ref: 42407
BacDive-ID: 139799
DSM-Number: 21347
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardioides sp. BX5-6 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 35761
- Matching level: species
strain history
- @ref: 42407
- history: <- S.-T. Lee, KAIST <- W.-T. Im; BX5-6
doi: 10.13145/bacdive139799.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Nocardioidaceae
- genus: Nocardioides
- species: Nocardioides sp.
- full scientific name: Nocardioides Prauser 1976 (Approved Lists 1980)
synonyms
@ref synonym 20215 Marmoricola 20215 Pimelobacter
@ref: 42407
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardioidaceae
genus: Nocardioides
species: Nocardioides sp.
full scientific name: Nocardioides sp.
strain designation: BX5-6
type strain: no
Culture and growth conditions
culture medium
- @ref: 42407
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 42407
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 42407
- sample type: soil
- geographic location: Baekdu mountain, Jilin province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_59860.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_142;96_4676;97_5668;98_7122;99_59860&stattab=map
- Last taxonomy: Nocardioides
- 16S sequence: GQ339905
- Sequence Identity:
- Total samples: 416
- soil counts: 307
- aquatic counts: 18
- animal counts: 38
- plant counts: 53
Sequence information
16S sequences
- @ref: 42407
- description: Nocardioides sp. BX5-6 16S ribosomal RNA gene, partial sequence
- accession: GQ339905
- length: 1424
- database: ena
- NCBI tax ID: 661489
External links
@ref: 42407
culture collection no.: DSM 21347
straininfo link
- @ref: 96242
- straininfo: 398662
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42407 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21347 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21347) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 96242 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398662.1 |