Strain identifier
BacDive ID: 139773
Type strain: 
Species: Rhodococcus erythropolis
Strain Designation: ACN1
Strain history: <- R. Egelkamp; University of Göttingen, Institute of Microbiology and Genetics, Göttingen, GERMANY; ACN1<-R. Egelkamp; University of Göttingen, Institute of Microbiology and Genetics, Department of Genomic and Applied Microbiology
NCBI tax ID(s): 1833 (species)
General
@ref: 42382
BacDive-ID: 139773
DSM-Number: 105063
keywords: genome sequence, human pathogen
description: Rhodococcus erythropolis ACN1 is a human pathogen that was isolated from Compost soil.
NCBI tax id
- NCBI tax id: 1833
- Matching level: species
strain history
- @ref: 42382
- history: <- R. Egelkamp; University of Göttingen, Institute of Microbiology and Genetics, Göttingen, GERMANY; ACN1<-R. Egelkamp; University of Göttingen, Institute of Microbiology and Genetics, Department of Genomic and Applied Microbiology
doi: 10.13145/bacdive139773.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- genus: Rhodococcus
- species: Rhodococcus erythropolis
- full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)
synonyms
@ref synonym 20215 Mycobacterium erythropolis 20215 Rhodococcus qingshengii 20215 Rhodococcus baikonurensis 20215 Rhodococcus jialingiae 20215 Rhodococcus enclensis 20215 Rhodococcus degradans
@ref: 42382
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus erythropolis
full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018
strain designation: ACN1
type strain: no
Morphology
multimedia
- @ref: 42382
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_105063.jpg
- caption: Medium 215 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 42382 | BHI MEDIUM (DSMZ Medium 215) | yes | https://mediadive.dsmz.de/medium/215 | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water |
| 42382 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
culture temp
- @ref: 42382
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 42382
- sample type: Compost soil
- geographic location: Experimental Botanical Garden Göttingen (51.556278 N, 9.954500000000053 E)
- country: Germany
- origin.country: DEU
- continent: Europe
- latitude: 51.5563
- longitude: 9.9545
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Biodegradation | #Composting |
| #Environmental | #Terrestrial | #Soil |
Safety information
risk assessment
- @ref: 42382
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Rhodococcus erythropolis ACN1 | GCA_002303875 | contig | ncbi | 1833 |
| 66792 | Rhodococcus erythropolis ACN1 | 2862008770 | draft | img | 1833 |
External links
@ref: 42382
culture collection no.: DSM 105063
straininfo link
- @ref: 96218
- straininfo: 402201
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 42382 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-105063 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 105063) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 96218 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402201.1 |