Strain identifier
BacDive ID: 139692
Type strain:
Species: Bacillus sp.
Strain Designation: SW-93
Strain history: J.-H. Yoon SW-93.
NCBI tax ID(s): 1409 (species)
version 8.1 (current version)
General
@ref: 42303
BacDive-ID: 139692
DSM-Number: 16207
keywords: 16S sequence, Bacteria, mesophilic
description: Bacillus sp. SW-93 is a mesophilic bacterium that was isolated from seawater.
NCBI tax id
- NCBI tax id: 1409
- Matching level: species
strain history
@ref | history |
---|---|
42303 | <- J. H. Yoon, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, South Korea; KCCM 41640 |
67770 | J.-H. Yoon SW-93. |
doi: 10.13145/bacdive139692.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus sp.
- full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
synonyms
@ref synonym 20215 Quasibacillus 20215 Pseudobacillus 20215 Maribacillus
@ref: 42303
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus sp.
full scientific name: Bacillus sp.
strain designation: SW-93
type strain: no
Culture and growth conditions
culture medium
- @ref: 42303
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
42303 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-7
Isolation, sampling and environmental information
isolation
@ref | sample type | country | origin.country | continent | geographic location |
---|---|---|---|---|---|
42303 | seawater | Republic of Korea | KOR | Asia | |
67770 | Seawater | Republic of Korea | KOR | Asia | Baekryung Island, Yellow Sea |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_6943.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_3264;97_4003;98_5107;99_6943&stattab=map
- Last taxonomy: Alkalihalobacillus
- 16S sequence: AF541965
- Sequence Identity:
- Total samples: 1394
- soil counts: 316
- aquatic counts: 683
- animal counts: 370
- plant counts: 25
Sequence information
16S sequences
- @ref: 42303
- description: Bacillus baekryungensis 16S ribosomal RNA gene, partial sequence
- accession: AF541965
- length: 1508
- database: ena
- NCBI tax ID: 208200
GC content
- @ref: 67770
- GC-content: 41
- method: high performance liquid chromatography (HPLC)
External links
@ref: 42303
culture collection no.: DSM 16207, KCCM 41640, JCM 11806, CIP 108440
straininfo link
@ref | straininfo |
---|---|
96145 | 231967 |
96146 | 403822 |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
42303 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16207 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16207) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
96145 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID231967.1 | |
96146 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403822.1 |