Strain identifier
BacDive ID: 139674
Type strain:
Species: Aggregatibacter aphrophilus
Strain history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 252-86, Haemophilus paraphrophilus <- Lariboisière Hosp., Paris, France
NCBI tax ID(s): 732 (species)
General
@ref: 42278
BacDive-ID: 139674
keywords: Bacteria, mesophilic, Gram-negative, rod-shaped
description: Aggregatibacter aphrophilus CIP 102283 is a mesophilic, Gram-negative, rod-shaped bacterium of the family Pasteurellaceae.
NCBI tax id
- NCBI tax id: 732
- Matching level: species
strain history
- @ref: 42278
- history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 252-86, Haemophilus paraphrophilus <- Lariboisière Hosp., Paris, France
doi: 10.13145/bacdive139674.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Aggregatibacter
- species: Aggregatibacter aphrophilus
- full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006
synonyms
@ref synonym 20215 Haemophilus paraphrophilus 20215 Haemophilus aphrophilus
@ref: 42278
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Aggregatibacter
species: Aggregatibacter aphrophilus
type strain: no
Morphology
cell morphology
- @ref: 42278
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
42278 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |
42278 | CIP Medium 10 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=10 |
culture temp
- @ref: 42278
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
42278 | 17632 | nitrate | + | reduction |
42278 | 16301 | nitrite | - | reduction |
metabolite production
- @ref: 42278
- Chebi-ID: 35581
- metabolite: indole
- production: no
enzymes
@ref | value | activity | ec |
---|---|---|---|
42278 | oxidase | + | |
42278 | catalase | - | 1.11.1.6 |
42278 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | - | |
68382 | esterase lipase (C 8) | - | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
42278 | - | + | - | - | - | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | geographic location | country | origin.country | continent | sample type | isolation date |
---|---|---|---|---|---|---|
42278 | Paris | France | FRA | Europe | ||
42278 | Paris | France | FRA | Europe | Human, Sinus puncture | 1986 |
Safety information
risk assessment
- @ref: 42278
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
External links
@ref: 42278
culture collection no.: CIP 102283
straininfo link
- @ref: 96131
- straininfo: 68820
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
42278 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102283 | Collection of Institut Pasteur (CIP 102283) | |
68382 | Automatically annotated from API zym | |||
96131 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID68820.1 |