Strain identifier
BacDive ID: 139468
Type strain: 
Species: Elizabethkingia anophelis
Strain history: CIP <- 2002, Inst. Pasteur, Paris, France: strain R645 Flavobacterium meningosepticum <- Minck
NCBI tax ID(s): 1117645 (species)
version 8.1 (current version)
General
@ref: 41692
BacDive-ID: 139468
keywords: genome sequence, Bacteria, mesophilic
description: Elizabethkingia anophelis CIP 111067 is a mesophilic bacterium of the family Weeksellaceae.
NCBI tax id
- NCBI tax id: 1117645
- Matching level: species
strain history
- @ref: 41692
- history: CIP <- 2002, Inst. Pasteur, Paris, France: strain R645 Flavobacterium meningosepticum <- Minck
doi: 10.13145/bacdive139468.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Weeksellaceae
- genus: Elizabethkingia
- species: Elizabethkingia anophelis
- full scientific name: Elizabethkingia anophelis Kämpfer et al. 2011
synonyms
@ref synonym 20215 Elizabethkingia anophelis subsp. endophytica 20215 Elizabethkingia endophytica
@ref: 41692
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Elizabethkingia
species: Elizabethkingia anophelis
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain | cell shape |
|---|---|---|---|---|
| 69480 | no | 93.921 | ||
| 69480 | 99.976 | negative | ||
| 41692 | no | negative | rod-shaped |
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41692 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 41692 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
- @ref: 41692
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.994 |
Isolation, sampling and environmental information
isolation
| @ref | country | origin.country | continent | sample type |
|---|---|---|---|---|
| 41692 | France | FRA | Europe | |
| 41692 | France | FRA | Europe | Human |
Safety information
risk assessment
- @ref: 41692
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Elizabethkingia anophelis Illumina sequencing of Elizabethkingia anophelis CIP111067 | GCA_900156995 | scaffold | ncbi | 1117645 |
| 66792 | Elizabethkingia anophelis strain Illumina sequencing of Elizabethkingia anophelis CIP111067 | 1117645.184 | wgs | patric | 1117645 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 90.485 | no |
| flagellated | no | 96.379 | no |
| gram-positive | no | 97.871 | no |
| anaerobic | no | 99.769 | no |
| aerobic | yes | 91.079 | no |
| halophile | no | 94.441 | no |
| spore-forming | no | 94.606 | no |
| thermophile | no | 99.288 | yes |
| glucose-util | yes | 88.065 | no |
| glucose-ferment | no | 91.053 | no |
External links
@ref: 41692
culture collection no.: CIP 111067, CIP 200591
straininfo link
- @ref: 95965
- straininfo: 413587
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 41692 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111067 | Collection of Institut Pasteur (CIP 111067) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 95965 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID413587.1 |