Strain identifier

BacDive ID: 139464

Type strain: No

Species: Yersinia pseudotuberculosis

Strain history: CIP <- 1951, P. Boquet, Inst. Pasteur, Paris, France

NCBI tax ID(s): 633 (species)

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General

@ref: 41687

BacDive-ID: 139464

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped

description: Yersinia pseudotuberculosis CIP A1 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from Animal, Guinea pig.

NCBI tax id

  • NCBI tax id: 633
  • Matching level: species

strain history

@refhistory
416871951, P. Boquet, Inst. Pasteur, Paris, France
41687CIP <- 1951, P. Boquet, Inst. Pasteur, Paris, France

doi: 10.13145/bacdive139464.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Yersinia
  • species: Yersinia pseudotuberculosis
  • full scientific name: Yersinia pseudotuberculosis (Pfeiffer 1889) Smith and Thal 1965 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Bacillus pseudotuberkulosis
    20215Pasteurella lymphangitidis

@ref: 41687

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Yersiniaceae

genus: Yersinia

species: Yersinia pseudotuberculosis

type strain: no

Morphology

cell morphology

  • @ref: 41687
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41687MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
41687CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3
41687CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
41687positivegrowth30mesophilic
41687positivegrowth5-37
41687nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 41687
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4168729864mannitol+fermentation
4168716947citrate-carbon source
4168717234glucose+fermentation
4168717716lactose-fermentation
4168717632nitrate+reduction
4168716301nitrite-reduction
4168715792malonate-assimilation
41687132112sodium thiosulfate-builds gas from

antibiotic resistance

  • @ref: 41687
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 41687
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4168715688acetoin-
4168717234glucose+

enzymes

@refvalueactivityec
41687oxidase-
41687beta-galactosidase+3.2.1.23
41687alcohol dehydrogenase-1.1.1.1
41687gelatinase-
41687catalase+1.11.1.6
41687lysine decarboxylase-4.1.1.18
41687ornithine decarboxylase-4.1.1.17
41687phenylalanine ammonia-lyase-4.3.1.24
41687tryptophan deaminase-
41687urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
41687-++--++-+-++-+-+++--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
41687+++++-+--++---+--+++++-+--+----+-+---+--+--------------++--++--------------+------+---+----+--+----

Isolation, sampling and environmental information

isolation

  • @ref: 41687
  • sample type: Animal, Guinea pig

Safety information

risk assessment

  • @ref: 41687
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41687

culture collection no.: CIP A1

straininfo link

  • @ref: 95963
  • straininfo: 105391

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41687Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20A1Collection of Institut Pasteur (CIP A1)
68382Automatically annotated from API zym
95963Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID105391.1