Strain identifier
BacDive ID: 139433
Type strain: 
Species: Mycoplasmopsis arginini
Strain Designation: G 230
Strain history: CIP <- 1995, C. Bébéar, Pellegrin Hosp., Bordeaux, France: strain G 230 <- M.F. Barile, USA <- J.A. Morris
NCBI tax ID(s): 2094 (species)
version 8.1 (current version)
General
@ref: 41620
BacDive-ID: 139433
keywords: genome sequence, Bacteria, mesophilic, Gram-negative
description: Mycoplasmopsis arginini G 230 is a mesophilic, Gram-negative bacterium that was isolated from Animal, Mouse, brain infected with Scrapie agent.
NCBI tax id
- NCBI tax id: 2094
- Matching level: species
strain history
- @ref: 41620
- history: CIP <- 1995, C. Bébéar, Pellegrin Hosp., Bordeaux, France: strain G 230 <- M.F. Barile, USA <- J.A. Morris
doi: 10.13145/bacdive139433.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/mycoplasmatota
- domain: Bacteria
- phylum: Mycoplasmatota
- class: Mollicutes
- order: Mycoplasmoidales
- family: Metamycoplasmataceae
- genus: Mycoplasmopsis
- species: Mycoplasmopsis arginini
- full scientific name: Mycoplasmopsis arginini (Barile et al. 1968) Gupta et al. 2018
synonyms
- @ref: 20215
- synonym: Mycoplasma arginini
@ref: 41620
domain: Bacteria
phylum: Tenericutes
class: Mollicutes
order: Mycoplasmoidales
family: Metamycoplasmataceae
genus: Mycoplasma
species: Mycoplasma arginini
strain designation: G 230
type strain: yes
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.834
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41620 | MEDIUM 89 - for Mycoplasma | yes | Distilled water make up to (670.000 ml);PPLO broth (17.000 g);Yeast extract solution 25 % - M00263 (100.000 ml);0.1 % Phenol red - M00387 (20.000 ml);Sterile supplement - M00276 (210.000 ml) | |
| 41620 | CIP Medium 89 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=89 |
culture temp
- @ref: 41620
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.998 |
Isolation, sampling and environmental information
isolation
- @ref: 41620
- sample type: Animal, Mouse, brain infected with Scrapie agent
Safety information
risk assessment
- @ref: 41620
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Mycoplasmopsis arginini NCTC10129 | GCA_900660725 | complete | ncbi | 2094 |
| 66792 | Mycoplasma arginini ATCC 23838 | 1266999.3 | wgs | patric | 1266999 |
| 66792 | Mycoplasma arginini strain NCTC10129 | 2094.45 | complete | patric | 2094 |
| 66792 | Mycoplasma arginini ATCC 23838 | 2523231014 | draft | img | 1266999 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| flagellated | no | 97.312 | no |
| gram-positive | no | 50 | no |
| anaerobic | no | 94.059 | no |
| aerobic | no | 95.069 | no |
| halophile | no | 54.099 | no |
| spore-forming | no | 98.328 | no |
| thermophile | no | 95.799 | no |
| glucose-util | yes | 86.225 | no |
| motile | no | 94.321 | no |
| glucose-ferment | yes | 74.018 | no |
External links
@ref: 41620
culture collection no.: CIP 71.23, ATCC 23838, NCTC 10129, NBRC 111899
straininfo link
- @ref: 95935
- straininfo: 389301
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 41620 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2071.23 | Collection of Institut Pasteur (CIP 71.23) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 95935 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID389301.1 |