Strain identifier

BacDive ID: 139307

Type strain: No

Species: Salmonella enterica

Strain Designation: 39, M179

Strain history: CIP <- 1999, D. Mazel, Inst. Pasteur, Paris, France <- N. Datta: strain 39 <- Murray: strain M179

NCBI tax ID(s): 28901 (species)

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General

@ref: 41448

BacDive-ID: 139307

keywords: Bacteria, facultative anaerobe, Gram-negative, motile, rod-shaped

description: Salmonella enterica 39 is a facultative anaerobe, Gram-negative, motile bacterium of the family Enterobacteriaceae.

NCBI tax id

  • NCBI tax id: 28901
  • Matching level: species

strain history

  • @ref: 41448
  • history: CIP <- 1999, D. Mazel, Inst. Pasteur, Paris, France <- N. Datta: strain 39 <- Murray: strain M179

doi: 10.13145/bacdive139307.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Salmonella
  • species: Salmonella enterica
  • full scientific name: Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

  • synonyms

    @refsynonym
    20215Bacillus typhi
    20215Bacillus typhimurium
    20215Bacillus enteritidis
    20215Bacillus choleraesuis
    20215Salmonella typhi
    20215Salmonella choleraesuis
    20215Salmonella paratyphi
    20215Salmonella typhimurium
    20215Salmonella enteritidis

@ref: 41448

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Salmonella

species: Salmonella enterica

strain designation: 39, M179

type strain: no

Morphology

cell morphology

  • @ref: 41448
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41448MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
41448CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
41448positivegrowth37
41448positivegrowth30-41
41448nogrowth5
41448nogrowth10

Physiology and metabolism

oxygen tolerance

  • @ref: 41448
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate+builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose+builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol+builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose+builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose+builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
41448mannitol+fermentation29864
41448citrate+carbon source16947
41448esculin-hydrolysis4853
41448glucose+fermentation17234
41448lactose+fermentation17716
41448nitrate+reduction17632
41448nitrite-reduction16301
41448malonate-assimilation15792
41448sodium thiosulfate+builds gas from132112

antibiotic resistance

  • @ref: 41448
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 41448
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4144815688acetoin-
4144817234glucose+

enzymes

@refvalueactivityec
41448oxidase-
41448alcohol dehydrogenase-1.1.1.1
41448gelatinase-
41448catalase+1.11.1.6
41448lysine decarboxylase-4.1.1.18
41448ornithine decarboxylase+4.1.1.17
41448phenylalanine ammonia-lyase-4.3.1.24
41448tryptophan deaminase-
41448urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
41448-+++-+----+++-------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
41448----++---++++-+--++--+-----+-+----------------+-+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
41448--+---+--+----+--+-+---+---------+--+------+-+-+-++--++----++----++--------+--+++-----+--+++-++-+--

Isolation, sampling and environmental information

isolation

  • @ref: 41448
  • isolation date: 1935

Safety information

risk assessment

  • @ref: 41448
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41448

culture collection no.: CIP 106196

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41448Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106196Collection of Institut Pasteur (CIP 106196)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym