Strain identifier

BacDive ID: 139251

Type strain: No

Species: Rhodococcus erythropolis

Strain history: CIP <- 1995, IFO <- 1967, IAM, Corynebacterium hydrocarboclastus

NCBI tax ID(s): 1833 (species)

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General

@ref: 41382

BacDive-ID: 139251

keywords: obligate aerobe, mesophilic, Gram-positive, rod-shaped

description: Rhodococcus erythropolis CIP 104647 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from Soil in petroleum zone.

NCBI tax id

  • NCBI tax id: 1833
  • Matching level: species

strain history

@refhistory
67770IAM 1414 <-- H. Iizuka and K. Komagata Kp-6.
41382CIP <- 1995, IFO <- 1967, IAM, Corynebacterium hydrocarboclastus

doi: 10.13145/bacdive139251.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • genus: Rhodococcus
  • species: Rhodococcus erythropolis
  • full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Mycobacterium erythropolis
    20215Rhodococcus qingshengii
    20215Rhodococcus baikonurensis
    20215Rhodococcus jialingiae
    20215Rhodococcus enclensis
    20215Rhodococcus degradans

@ref: 41382

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Nocardiaceae

genus: Rhodococcus

species: Rhodococcus erythropolis

type strain: no

Morphology

cell morphology

  • @ref: 41382
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41382MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
41382CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
41382CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
41382positivegrowth30mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 41382
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4138217632nitrate-reduction
4138216301nitrite-reduction

metabolite production

  • @ref: 41382
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
41382oxidase-
41382catalase+1.11.1.6
41382urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
41382-+++++++++++-+-++---

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil in petroleum zone
  • country: Japan
  • origin.country: JPN
  • continent: Asia

Safety information

risk assessment

  • @ref: 41382
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41382

culture collection no.: CIP 104647, IAM 1414, IFO 12539, JCM 20158, NBRC 12539

straininfo link

  • @ref: 95798
  • straininfo: 62692

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41382Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104647Collection of Institut Pasteur (CIP 104647)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68382Automatically annotated from API zym
95798Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID62692.1