Strain identifier
BacDive ID: 13912
Type strain: 
Species: Thauera aromatica
Strain Designation: SP
Strain history: <- G. Fuchs; SP
NCBI tax ID(s): 59405 (species)
version 8.1 (current version)
General
@ref: 5553
BacDive-ID: 13912
DSM-Number: 14805
keywords: genome sequence, Bacteria, aerobe, mesophilic
description: Thauera aromatica SP is an aerobe, mesophilic bacterium that was isolated from anaerobic sewage sludge.
NCBI tax id
- NCBI tax id: 59405
- Matching level: species
strain history
- @ref: 5553
- history: <- G. Fuchs; SP
doi: 10.13145/bacdive13912.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Rhodocyclales
- family: Zoogloeaceae
- genus: Thauera
- species: Thauera aromatica
- full scientific name: Thauera aromatica Anders et al. 1995
@ref: 5553
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Rhizobiales
family: Zoogloeaceae
genus: Thauera
species: Thauera aromatica
full scientific name: Thauera aromatica Anders et al. 1995
strain designation: SP
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 5553 | R2A MEDIUM (DSMZ Medium 830) | yes | https://mediadive.dsmz.de/medium/830 | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
| 5553 | THAUERA AROMATICA MEDIUM (DSMZ Medium 586) | yes | https://mediadive.dsmz.de/medium/586 | Name: THAUERA AROMATICA MEDIUM (DSMZ Medium 586) Composition: K2HPO4 5.83251 g/l KNO3 1.97044 g/l KH2PO4 0.803941 g/l Na-benzoate 0.70936 g/l NH4Cl 0.522168 g/l MgSO4 x 7 H2O 0.197044 g/l CaCl2 x 2 H2O 0.0246305 g/l HCl 0.0246305 g/l FeCl2 x 4 H2O 0.0147783 g/l CoCl2 x 6 H2O 0.00187192 g/l MnCl2 x 4 H2O 0.000985222 g/l ZnCl2 0.000689655 g/l Na2MoO4 x 2 H2O 0.00035468 g/l p-Aminobenzoic acid 0.000246305 g/l alpha-lipoic acid 0.000246305 g/l Riboflavin 0.000246305 g/l Pantothenic acid 0.000246305 g/l Vitamin B12 0.000246305 g/l Thiamine-HCl x 2 H2O 0.000246305 g/l NiCl2 x 6 H2O 0.000236453 g/l Nicotine amide 0.000123153 g/l Nicotinic acid 0.000123153 g/l Folic acid 9.85222e-05 g/l Biotin 9.85222e-05 g/l H3BO3 5.91133e-05 g/l Pyridoxamine hydrochloride 4.92611e-05 g/l CuCl2 x 2 H2O 1.97044e-05 g/l Distilled water |
culture temp
- @ref: 5553
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 5553 | aerobe |
| 5553 | anaerobe |
Isolation, sampling and environmental information
isolation
- @ref: 5553
- sample type: anaerobic sewage sludge
- geographic location: Konstanz
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Sewage sludge |
| #Condition | #Anoxic (anaerobic) |
Safety information
risk assessment
- @ref: 5553
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Thauera aromatica SP
- accession: GCA_023093695
- assembly level: contig
- database: ncbi
- NCBI tax ID: 59405
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | yes | 68.68 | no |
| gram-positive | no | 98.996 | no |
| anaerobic | no | 93.484 | no |
| aerobic | no | 69.112 | no |
| halophile | no | 87.432 | no |
| spore-forming | no | 95.06 | no |
| motile | yes | 86.492 | no |
| glucose-ferment | no | 91.084 | no |
| thermophile | no | 92.256 | yes |
| glucose-util | no | 82.075 | no |
External links
@ref: 5553
culture collection no.: DSM 14805
straininfo link
- @ref: 83087
- straininfo: 113552
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 5553 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14805) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-14805 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 83087 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID113552.1 | StrainInfo: A central database for resolving microbial strain identifiers |