Strain identifier

BacDive ID: 139101

Type strain: No

Species: Caulobacter vibrioides

Strain history: CIP <- 1993, ATCC <- J. Schmidt: strain CB 15 <- J. Stove

NCBI tax ID(s): 190650 (strain), 155892 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 8.1 (current version)

General

@ref: 41146

BacDive-ID: 139101

keywords: Bacteria, mesophilic, Gram-negative, motile, rod-shaped

description: Caulobacter vibrioides CIP 103742 is a mesophilic, Gram-negative, motile bacterium that was isolated from Environment, Pond water.

NCBI tax id

NCBI tax idMatching level
190650strain
155892species

strain history

  • @ref: 41146
  • history: CIP <- 1993, ATCC <- J. Schmidt: strain CB 15 <- J. Stove

doi: 10.13145/bacdive139101.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Caulobacterales
  • family: Caulobacteraceae
  • genus: Caulobacter
  • species: Caulobacter vibrioides
  • full scientific name: Caulobacter vibrioides Henrici and Johnson 1935 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Caulobacter crescentus

@ref: 41146

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Caulobacterales

family: Caulobacteraceae

genus: Caulobacter

species: Caulobacter vibrioides

type strain: no

Morphology

cell morphology

  • @ref: 41146
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41146MEDIUM 28 - for CaulobacteryesDistilled water make up to (1000.000 ml);Magnesium sulphate heptahydrate (0.200 g);Agar (10.000 g);Yeast extract (1.000 g);Peptone (2.000 g)
41146CIP Medium 28yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=28

culture temp

@refgrowthtypetemperaturerange
41146positivegrowth30mesophilic
41146positivegrowth25-37mesophilic
41146nogrowth10psychrophilic
41146nogrowth41thermophilic

Physiology and metabolism

halophily

@refsaltgrowthtested relationconcentration
41146NaClpositivegrowth0 %
41146NaClnogrowth2 %
41146NaClnogrowth4 %
41146NaClnogrowth6 %
41146NaClnogrowth8 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371melibiose-builds acid from28053
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-fructose-builds acid from15824
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371D-xylose-builds acid from65327
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
41146nitrate-reduction17632
41146nitrite-reduction16301
41146glucose-degradation17234

antibiotic resistance

  • @ref: 41146
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

enzymes

@refvalueactivityec
41146oxidase+
41146catalase+1.11.1.6

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
41146---+/-+/--+/---+/-+/--+/----------------+/--+/-------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
41146---------------------------------------------------------------------------------------------------

Isolation, sampling and environmental information

isolation

  • @ref: 41146
  • sample type: Environment, Pond water
  • isolation date: 1960

Safety information

risk assessment

  • @ref: 41146
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41146

culture collection no.: CIP 103742, ATCC 19089, CB 15

straininfo link

  • @ref: 95679
  • straininfo: 45609

literature

  • topic: Genetics
  • Pubmed-ID: 2152901
  • title: Identification, distribution, and sequence analysis of new insertion elements in Caulobacter crescentus.
  • authors: Ohta N, Mullin DA, Tarleton J, Ely B, Newton A
  • journal: J Bacteriol
  • DOI: 10.1128/jb.172.1.236-242.1990
  • year: 1990
  • mesh: Bacteria/*genetics, Base Sequence, Chromosome Mapping, *DNA Transposable Elements, DNA, Bacterial/*analysis, Molecular Sequence Data, Multigene Family
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41146Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103742Collection of Institut Pasteur (CIP 103742)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68371Automatically annotated from API 50CH acid
95679Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID45609.1